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Selected Module: B_9_4


Module Info

Module_Name B_9_4
Cell_Type B
Name B_9_4: CD4 TEM
Meta_Module B_7
Gene_Number 29

Genes:

AAK1, ANXA1, CD3D, CD3E, DENND2D, DNAJB1, FLT3LG, FYB1, FYN, GIMAP4, GIMAP7, IL32, IL7R, LAT, LCK, LEPROTL1, MGAT4A, NDFIP1, NOSIP, PIK3R1, RCAN3, RNF125, SEMA4D, SORL1, SPOCK2, SYNE2, TCF7, TOB1, TSPAN14


UMAP Visualizations


UMAP for B_9_4

UMAP for B_9_4


Word Cloud

Enriched TF

Wordcloud for B_9_4
TF p.adjust Genes
STAT4 0.00182775675931345 AAK1/CD3D/LAT/LEPROTL1/NDFIP1
AP4 0.00554051020280923 LAT/LCK/SPOCK2/TCF7
PEA3 0.00554051020280923 CD3E/DENND2D/LCK/SORL1
CETS1P54 0.00554051020280923 CD3E/IL7R/NOSIP/TCF7
AML 0.00554051020280923 IL7R/LCK/PIK3R1/TCF7
RACCACAR 0.00554051020280923 IL7R/LCK/PIK3R1/TCF7
HOXA4 0.00554051020280923 NDFIP1/PIK3R1/SYNE2/TOB1
ELK1 0.00554051020280923 FYN/IL7R/LCK/TCF7


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_9_4 D015754 Genes, nef 4/29 78/26076 1.66194163817944e-06 7.68984887719785e-05 4.91726686687517e-05 CD3E/FYN/LCK/PIK3R1 4
MeSH_gene2pubmed B_9_4 D019408 Platelet Endothelial Cell Adhesion Molecule-1 6/29 340/26076 1.73409663619014e-06 7.74268480912555e-05 4.95105275546641e-05 CD3E/FYN/LAT/LCK/PIK3R1/SEMA4D 6
GO B_9_4 GO:0007159 leukocyte cell-cell adhesion 7/27 430/18986 1.74672417801429e-06 0.00022248899217457 0.00014985054790333 ANXA1/CD3E/FYN/IL7R/LCK/NDFIP1/SEMA4D 7
MeSH_gene2pubmed B_9_4 D053824 Protein Tyrosine Phosphatase, Non-Receptor Type 6 6/29 341/26076 1.76381254413491e-06 7.74268480912555e-05 4.95105275546641e-05 CD3E/FYN/LAT/LCK/PIK3R1/SEMA4D 6
MeSH_gene2pubmed B_9_4 D054592 Protein Tyrosine Phosphatase, Non-Receptor Type 11 6/29 344/26076 1.85546967826632e-06 7.94141022297987e-05 5.07812754051836e-05 CD3E/FYB1/FYN/LAT/LCK/PIK3R1 6
reactome B_9_4 R-HSA-2172127 DAP12 interactions 4/23 45/11146 1.94094343759497e-06 6.37738558066918e-05 3.35651872666799e-05 FYN/LAT/LCK/PIK3R1 4
MeSH_gene2pubmed B_9_4 D009244 NAD+ Nucleosidase 4/29 83/26076 2.13282975107032e-06 8.90586471666437e-05 5.69484708886556e-05 CD3E/LCK/PIK3R1/TCF7 4
MeSH_gene2pubmed B_9_4 D017455 Receptors, IgE 6/29 361/26076 2.4514834855084e-06 9.7903787898688e-05 6.26044880808137e-05 CD3D/CD3E/FYN/LAT/SEMA4D/TCF7 6
MeSH_gene2pubmed B_9_4 D013745 Tetanus Toxoid 4/29 86/26076 2.45903205586658e-06 9.7903787898688e-05 6.26044880808137e-05 DNAJB1/FLT3LG/FYN/LCK 4
onek1k B_9_4 CD8 TCM CD8 TCM 5/23 65/6471 2.56038751339081e-06 4.26731252231802e-06 4.4919079182295e-07 FLT3LG/IL7R/NOSIP/RCAN3/TOB1 5