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Selected Module: B_9_4


Module Info

Module_Name B_9_4
Cell_Type B
Name B_9_4: CD4 TEM
Meta_Module B_7
Gene_Number 29

Genes:

AAK1, ANXA1, CD3D, CD3E, DENND2D, DNAJB1, FLT3LG, FYB1, FYN, GIMAP4, GIMAP7, IL32, IL7R, LAT, LCK, LEPROTL1, MGAT4A, NDFIP1, NOSIP, PIK3R1, RCAN3, RNF125, SEMA4D, SORL1, SPOCK2, SYNE2, TCF7, TOB1, TSPAN14


UMAP Visualizations


UMAP for B_9_4

UMAP for B_9_4


Word Cloud

Enriched TF

Wordcloud for B_9_4
TF p.adjust Genes
STAT4 0.00182775675931345 AAK1/CD3D/LAT/LEPROTL1/NDFIP1
AP4 0.00554051020280923 LAT/LCK/SPOCK2/TCF7
PEA3 0.00554051020280923 CD3E/DENND2D/LCK/SORL1
CETS1P54 0.00554051020280923 CD3E/IL7R/NOSIP/TCF7
AML 0.00554051020280923 IL7R/LCK/PIK3R1/TCF7
RACCACAR 0.00554051020280923 IL7R/LCK/PIK3R1/TCF7
HOXA4 0.00554051020280923 NDFIP1/PIK3R1/SYNE2/TOB1
ELK1 0.00554051020280923 FYN/IL7R/LCK/TCF7


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_9_4 D020663 ras Guanine Nucleotide Exchange Factors 2/29 119/26076 0.00773603759315443 0.0383886850999431 0.0245476097540217 FYN/LCK 2
MeSH_gene2pubmed B_9_4 D011720 D011720 3/29 369/26076 0.00781927052138188 0.0386895697474155 0.0247400101680473 FYN/LCK/TCF7 3
reactome B_9_4 R-HSA-373755 Semaphorin interactions 2/23 65/11146 0.0078292167749765 0.0327403610589926 0.0172317689784172 FYN/SEMA4D 2
MeSH_gene2pubmed B_9_4 D020666 ras-GRF1 2/29 120/26076 0.00786176325217616 0.0387877195611688 0.024802771977137 LAT/LCK 2
MeSH_gene2pubmed B_9_4 D006099 Granuloma 2/29 121/26076 0.00798841354774193 0.0390747542678119 0.0249863160591026 CD3E/FYN 2
MeSH_gene2pubmed B_9_4 D017565 Sarcoidosis, Pulmonary 2/29 121/26076 0.00798841354774193 0.0390747542678119 0.0249863160591026 CD3E/FYN 2
MeSH_gene2pubmed B_9_4 D018958 CD55 Antigens 2/29 121/26076 0.00798841354774193 0.0390747542678119 0.0249863160591026 FYN/LCK 2
MeSH_gene2pubmed B_9_4 D005647 Fucosyltransferases 2/29 122/26076 0.00811598641503627 0.0395856659331684 0.0253130180585927 FYB1/MGAT4A 2
MeSH_gene2pubmed B_9_4 D017370 Interleukin-11 2/29 123/26076 0.00824447979241708 0.0400981517176649 0.0256407266271345 FYN/PIK3R1 2
MeSH_gene2pubmed B_9_4 D019005 Cystic Fibrosis Transmembrane Conductance Regulator 3/29 380/26076 0.00847218415003797 0.0410888931016006 0.0262742553035321 ANXA1/DNAJB1/FYN 3