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Selected Module: B_9_4


Module Info

Module_Name B_9_4
Cell_Type B
Name B_9_4: CD4 TEM
Meta_Module B_7
Gene_Number 29

Genes:

AAK1, ANXA1, CD3D, CD3E, DENND2D, DNAJB1, FLT3LG, FYB1, FYN, GIMAP4, GIMAP7, IL32, IL7R, LAT, LCK, LEPROTL1, MGAT4A, NDFIP1, NOSIP, PIK3R1, RCAN3, RNF125, SEMA4D, SORL1, SPOCK2, SYNE2, TCF7, TOB1, TSPAN14


UMAP Visualizations


UMAP for B_9_4

UMAP for B_9_4


Word Cloud

Enriched TF

Wordcloud for B_9_4
TF p.adjust Genes
STAT4 0.00182775675931345 AAK1/CD3D/LAT/LEPROTL1/NDFIP1
AP4 0.00554051020280923 LAT/LCK/SPOCK2/TCF7
PEA3 0.00554051020280923 CD3E/DENND2D/LCK/SORL1
CETS1P54 0.00554051020280923 CD3E/IL7R/NOSIP/TCF7
AML 0.00554051020280923 IL7R/LCK/PIK3R1/TCF7
RACCACAR 0.00554051020280923 IL7R/LCK/PIK3R1/TCF7
HOXA4 0.00554051020280923 NDFIP1/PIK3R1/SYNE2/TOB1
ELK1 0.00554051020280923 FYN/IL7R/LCK/TCF7


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_9_4 D020703 ras GTPase-Activating Proteins 3/29 313/26076 0.00496762117681359 0.0278838277203439 0.0178302882619021 FYN/LCK/PIK3R1 3
reactome B_9_4 R-HSA-2428928 IRS-related events triggered by IGF1R 2/23 52/11146 0.00507293206944233 0.0228779289406223 0.0120410152319065 FLT3LG/PIK3R1 2
WikiPathways B_9_4 WP304 Kit receptor signaling 2/18 53/8836 0.0050791789985396 0.0400382095507687 0.0288363836099719 FYN/PIK3R1 2
MeSH_gene2pubmed B_9_4 D015683 Gene Products, gag 3/29 316/26076 0.00510091567990182 0.0284646152555582 0.0182016723227869 CD3D/CD3E/IL7R 3
MeSH_gene2pubmed B_9_4 D009285 Naphthoquinones 2/29 96/26076 0.00510434397398153 0.0284646152555582 0.0182016723227869 CD3D/CD3E 2
MeSH_gene2pubmed B_9_4 D011503 Transglutaminases 3/29 318/26076 0.00519097380528179 0.0288537245280598 0.0184504878930043 ANXA1/FYN/PIK3R1 3
reactome B_9_4 R-HSA-2428924 IGF1R signaling cascade 2/23 53/11146 0.00526527807778139 0.0232596100206176 0.0122419000108513 FLT3LG/PIK3R1 2
WikiPathways B_9_4 WP61 Notch signaling 2/18 54/8836 0.00526818546720641 0.0400382095507687 0.0288363836099719 LCK/PIK3R1 2
MeSH_gene2pubmed B_9_4 D051562 Proto-Oncogene Proteins c-bcr 2/29 98/26076 0.00531308052400315 0.0294368733239268 0.0188233818598647 LAT/PIK3R1 2
KEGG B_9_4 hsa04360 Axon guidance 3/17 184/8541 0.00535386147632081 0.0489495906406474 0.0366316837853529 FYN/PIK3R1/SEMA4D 3