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Selected Module: B_9_4


Module Info

Module_Name B_9_4
Cell_Type B
Name B_9_4: CD4 TEM
Meta_Module B_7
Gene_Number 29

Genes:

AAK1, ANXA1, CD3D, CD3E, DENND2D, DNAJB1, FLT3LG, FYB1, FYN, GIMAP4, GIMAP7, IL32, IL7R, LAT, LCK, LEPROTL1, MGAT4A, NDFIP1, NOSIP, PIK3R1, RCAN3, RNF125, SEMA4D, SORL1, SPOCK2, SYNE2, TCF7, TOB1, TSPAN14


UMAP Visualizations


UMAP for B_9_4

UMAP for B_9_4


Word Cloud

Enriched TF

Wordcloud for B_9_4
TF p.adjust Genes
STAT4 0.00182775675931345 AAK1/CD3D/LAT/LEPROTL1/NDFIP1
AP4 0.00554051020280923 LAT/LCK/SPOCK2/TCF7
PEA3 0.00554051020280923 CD3E/DENND2D/LCK/SORL1
CETS1P54 0.00554051020280923 CD3E/IL7R/NOSIP/TCF7
AML 0.00554051020280923 IL7R/LCK/PIK3R1/TCF7
RACCACAR 0.00554051020280923 IL7R/LCK/PIK3R1/TCF7
HOXA4 0.00554051020280923 NDFIP1/PIK3R1/SYNE2/TOB1
ELK1 0.00554051020280923 FYN/IL7R/LCK/TCF7


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
reactome B_9_4 R-HSA-1257604 PIP3 activates AKT signaling 4/23 273/11146 0.00215874052191064 0.0134191978389039 0.00706273570468629 FLT3LG/FYN/LCK/PIK3R1 4
MeSH_gene2pubmed B_9_4 D018033 Antibodies, Bispecific 2/29 62/26076 0.00216679658958236 0.015592582083278 0.00997066242413254 CD3D/CD3E 2
MeSH_gene2pubmed B_9_4 D000495 Allosteric Site 3/29 233/26076 0.00216766035970805 0.015592582083278 0.00997066242413254 FYN/LCK/PIK3R1 3
MeSH_gene2pubmed B_9_4 D019039 Platelet Glycoprotein GPIIb-IIIa Complex 3/29 233/26076 0.00216766035970805 0.015592582083278 0.00997066242413254 FYN/LAT/PIK3R1 3
MeSH_gene2pubmed B_9_4 D047392 beta-Cyclodextrins 3/29 233/26076 0.00216766035970805 0.015592582083278 0.00997066242413254 FYN/LAT/LCK 3
MeSH_gene2pubmed B_9_4 D015689 Oncogene Protein p21(ras) 3/29 234/26076 0.00219417742058103 0.0157172876319445 0.0100504052737471 FYN/LAT/PIK3R1 3
GO B_9_4 GO:0004715 non-membrane spanning protein tyrosine kinase activity 2/29 45/18737 0.00219732400994954 0.029607303577436 0.0187910131064222 FYN/LCK 2
GO B_9_4 GO:0046636 negative regulation of alpha-beta T cell activation 2/27 49/18986 0.00219786755665615 0.0339337430338275 0.0228550182925009 ANXA1/NDFIP1 2
MeSH_gene2pubmed B_9_4 D053631 Interleukin Receptor Common gamma Subunit 2/29 63/26076 0.00223629962367546 0.0158860786544912 0.0101583385395173 FYN/IL7R 2
MeSH_gene2pubmed B_9_4 D054633 Receptor-Like Protein Tyrosine Phosphatases, Class 5 2/29 63/26076 0.00223629962367546 0.0158860786544912 0.0101583385395173 FYN/LCK 2