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Selected Module: B_9_4


Module Info

Module_Name B_9_4
Cell_Type B
Name B_9_4: CD4 TEM
Meta_Module B_7
Gene_Number 29

Genes:

AAK1, ANXA1, CD3D, CD3E, DENND2D, DNAJB1, FLT3LG, FYB1, FYN, GIMAP4, GIMAP7, IL32, IL7R, LAT, LCK, LEPROTL1, MGAT4A, NDFIP1, NOSIP, PIK3R1, RCAN3, RNF125, SEMA4D, SORL1, SPOCK2, SYNE2, TCF7, TOB1, TSPAN14


UMAP Visualizations


UMAP for B_9_4

UMAP for B_9_4


Word Cloud

Enriched TF

Wordcloud for B_9_4
TF p.adjust Genes
STAT4 0.00182775675931345 AAK1/CD3D/LAT/LEPROTL1/NDFIP1
AP4 0.00554051020280923 LAT/LCK/SPOCK2/TCF7
PEA3 0.00554051020280923 CD3E/DENND2D/LCK/SORL1
CETS1P54 0.00554051020280923 CD3E/IL7R/NOSIP/TCF7
AML 0.00554051020280923 IL7R/LCK/PIK3R1/TCF7
RACCACAR 0.00554051020280923 IL7R/LCK/PIK3R1/TCF7
HOXA4 0.00554051020280923 NDFIP1/PIK3R1/SYNE2/TOB1
ELK1 0.00554051020280923 FYN/IL7R/LCK/TCF7


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_9_4 D051744 Protein Kinase C-epsilon 3/29 202/26076 0.00144258329001655 0.0118735701562901 0.00759254363166606 FYN/LCK/PIK3R1 3
reactome B_9_4 R-HSA-164952 The role of Nef in HIV-1 replication and disease pathogenesis 2/23 28/11146 0.00149026971815053 0.0103867283386249 0.00546669912559207 FYN/LCK 2
reactome B_9_4 R-HSA-9682385 FLT3 signaling in disease 2/23 28/11146 0.00149026971815053 0.0103867283386249 0.00546669912559207 FLT3LG/PIK3R1 2
MeSH_gene2pubmed B_9_4 D009036 Moths 3/29 205/26076 0.00150477918138321 0.0122675331358479 0.0078444629004438 FYN/LCK/PIK3R1 3
MeSH_gene2pubmed B_9_4 D016391 Genes, src 3/29 205/26076 0.00150477918138321 0.0122675331358479 0.0078444629004438 FYN/LCK/PIK3R1 3
MeSH_gene2pubmed B_9_4 D016283 Proto-Oncogene Proteins p21(ras) 4/29 454/26076 0.0015253052204455 0.0123545712890489 0.00790011936830473 CD3E/FYN/LCK/PIK3R1 4
MeSH_gene2pubmed B_9_4 D009166 D009166 2/29 52/26076 0.00152988850074671 0.0123545712890489 0.00790011936830473 FYN/LCK 2
GO B_9_4 GO:0050730 regulation of peptidyl-tyrosine phosphorylation 3/27 162/18986 0.00153448482901902 0.0269593110477652 0.0181576063252341 CD3E/FYN/SEMA4D 3
MeSH_gene2pubmed B_9_4 D007529 Isoflavones 3/29 208/26076 0.0015686386306866 0.0125491090454928 0.0080245163596363 CD3E/FYN/LCK 3
MeSH_gene2pubmed B_9_4 D015498 HIV-2 3/29 208/26076 0.0015686386306866 0.0125491090454928 0.0080245163596363 CD3D/CD3E/DNAJB1 3