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Selected Module: B_9_4


Module Info

Module_Name B_9_4
Cell_Type B
Name B_9_4: CD4 TEM
Meta_Module B_7
Gene_Number 29

Genes:

AAK1, ANXA1, CD3D, CD3E, DENND2D, DNAJB1, FLT3LG, FYB1, FYN, GIMAP4, GIMAP7, IL32, IL7R, LAT, LCK, LEPROTL1, MGAT4A, NDFIP1, NOSIP, PIK3R1, RCAN3, RNF125, SEMA4D, SORL1, SPOCK2, SYNE2, TCF7, TOB1, TSPAN14


UMAP Visualizations


UMAP for B_9_4

UMAP for B_9_4


Word Cloud

Enriched TF

Wordcloud for B_9_4
TF p.adjust Genes
STAT4 0.00182775675931345 AAK1/CD3D/LAT/LEPROTL1/NDFIP1
AP4 0.00554051020280923 LAT/LCK/SPOCK2/TCF7
PEA3 0.00554051020280923 CD3E/DENND2D/LCK/SORL1
CETS1P54 0.00554051020280923 CD3E/IL7R/NOSIP/TCF7
AML 0.00554051020280923 IL7R/LCK/PIK3R1/TCF7
RACCACAR 0.00554051020280923 IL7R/LCK/PIK3R1/TCF7
HOXA4 0.00554051020280923 NDFIP1/PIK3R1/SYNE2/TOB1
ELK1 0.00554051020280923 FYN/IL7R/LCK/TCF7


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
GO B_9_4 GO:0035739 CD4-positive, alpha-beta T cell proliferation 2/27 22/18986 0.00044205993781282 0.0121745696386828 0.00819980311391066 CD3E/NDFIP1 2
GO B_9_4 GO:2000561 regulation of CD4-positive, alpha-beta T cell proliferation 2/27 22/18986 0.00044205993781282 0.0121745696386828 0.00819980311391066 CD3E/NDFIP1 2
reactome B_9_4 R-HSA-5683057 MAPK family signaling cascades 5/23 325/11146 0.0004460877071326 0.00424862578751517 0.0022361188355343 DNAJB1/FLT3LG/FYN/LAT/PIK3R1 5
MeSH_gene2pubmed B_9_4 D016173 Macrophage Colony-Stimulating Factor 4/29 328/26076 0.00045538123343366 0.00526765318674618 0.00336839603677818 FLT3LG/FYN/LCK/PIK3R1 4
MeSH_gene2pubmed B_9_4 D015458 Leukemia, T-Cell 4/29 329/26076 0.00046063246477969 0.00529263610538817 0.00338437134136971 CD3E/FYN/LCK/TCF7 4
GO B_9_4 GO:0097038 perinuclear endoplasmic reticulum 2/29 22/19960 0.0004624204496044 0.0175719770849673 0.0126557175681205 FYN/PIK3R1 2
MeSH_gene2pubmed B_9_4 D051316 Wiskott-Aldrich Syndrome Protein 3/29 137/26076 0.00046903540891109 0.0053532574670386 0.00342313561591253 FYB1/FYN/PIK3R1 3
reactome B_9_4 R-HSA-1433559 Regulation of KIT signaling 2/23 16/11146 0.00048027943684954 0.00424862578751517 0.0022361188355343 FYN/LCK 2
reactome B_9_4 R-HSA-2730905 Role of LAT2/NTAL/LAB on calcium mobilization 2/23 16/11146 0.00048027943684954 0.00424862578751517 0.0022361188355343 FYN/PIK3R1 2
MeSH_gene2pubmed B_9_4 D019038 Platelet Glycoprotein GPIb-IX Complex 3/29 139/26076 0.00048930397314575 0.00554760531142739 0.00354741116815328 FYN/LAT/PIK3R1 3