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Selected Module: B_9_4


Module Info

Module_Name B_9_4
Cell_Type B
Name B_9_4: CD4 TEM
Meta_Module B_7
Gene_Number 29

Genes:

AAK1, ANXA1, CD3D, CD3E, DENND2D, DNAJB1, FLT3LG, FYB1, FYN, GIMAP4, GIMAP7, IL32, IL7R, LAT, LCK, LEPROTL1, MGAT4A, NDFIP1, NOSIP, PIK3R1, RCAN3, RNF125, SEMA4D, SORL1, SPOCK2, SYNE2, TCF7, TOB1, TSPAN14


UMAP Visualizations


UMAP for B_9_4

UMAP for B_9_4


Word Cloud

Enriched TF

Wordcloud for B_9_4
TF p.adjust Genes
STAT4 0.00182775675931345 AAK1/CD3D/LAT/LEPROTL1/NDFIP1
AP4 0.00554051020280923 LAT/LCK/SPOCK2/TCF7
PEA3 0.00554051020280923 CD3E/DENND2D/LCK/SORL1
CETS1P54 0.00554051020280923 CD3E/IL7R/NOSIP/TCF7
AML 0.00554051020280923 IL7R/LCK/PIK3R1/TCF7
RACCACAR 0.00554051020280923 IL7R/LCK/PIK3R1/TCF7
HOXA4 0.00554051020280923 NDFIP1/PIK3R1/SYNE2/TOB1
ELK1 0.00554051020280923 FYN/IL7R/LCK/TCF7


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
GO B_9_4 GO:0090083 regulation of inclusion body assembly 2/27 18/18986 0.00029382213920243 0.00880602234844939 0.00593102274798719 DNAJB1/SORL1 2
MeSH_gene2pubmed B_9_4 D015009 Yersinia Infections 2/29 23/26076 0.00029779449852439 0.00380465807069975 0.00243288514112625 FYB1/LAT 2
reactome B_9_4 R-HSA-449147 Signaling by Interleukins 6/23 473/11146 0.00030812950277929 0.00308129502779295 0.00162173422515419 ANXA1/FYN/IL32/IL7R/LCK/PIK3R1 6
KEGG B_9_4 hsa04664 Fc epsilon RI signaling pathway 3/17 69/8541 0.00031643462831197 0.00450040360265923 0.00336790072238479 FYN/LAT/PIK3R1 3
MeSH_gene2pubmed B_9_4 D053613 Janus Kinase 1 4/29 298/26076 0.00031690794785317 0.00400587494863032 0.00256155309061457 FYN/IL7R/LAT/PIK3R1 4
MeSH_gene2pubmed B_9_4 D000920 Antibody-Dependent Cell Cytotoxicity 3/29 120/26076 0.0003182237108725 0.00400587494863032 0.00256155309061457 CD3E/LAT/LCK 3
GO B_9_4 GO:1903706 regulation of hemopoiesis 5/27 433/18986 0.00032152941849404 0.00936109935558381 0.00630487761979304 ANXA1/IL7R/NDFIP1/PIK3R1/TCF7 5
MeSH_gene2pubmed B_9_4 D038981 Receptors, Collagen 3/29 122/26076 0.00033404151008139 0.00417429974641857 0.00266925217429618 FYB1/FYN/LAT 3
MeSH_gene2pubmed B_9_4 D019380 Anti-HIV Agents 4/29 305/26076 0.00034604904167058 0.00429301419811621 0.00274516402240584 CD3D/CD3E/IL7R/LCK 4
MeSH_gene2pubmed B_9_4 D005960 Glucosides 3/29 124/26076 0.00035035822375615 0.00431520344655067 0.00275935291712537 CD3E/LCK/PIK3R1 3