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Selected Module: B_9_4


Module Info

Module_Name B_9_4
Cell_Type B
Name B_9_4: CD4 TEM
Meta_Module B_7
Gene_Number 29

Genes:

AAK1, ANXA1, CD3D, CD3E, DENND2D, DNAJB1, FLT3LG, FYB1, FYN, GIMAP4, GIMAP7, IL32, IL7R, LAT, LCK, LEPROTL1, MGAT4A, NDFIP1, NOSIP, PIK3R1, RCAN3, RNF125, SEMA4D, SORL1, SPOCK2, SYNE2, TCF7, TOB1, TSPAN14


UMAP Visualizations


UMAP for B_9_4

UMAP for B_9_4


Word Cloud

Enriched TF

Wordcloud for B_9_4
TF p.adjust Genes
STAT4 0.00182775675931345 AAK1/CD3D/LAT/LEPROTL1/NDFIP1
AP4 0.00554051020280923 LAT/LCK/SPOCK2/TCF7
PEA3 0.00554051020280923 CD3E/DENND2D/LCK/SORL1
CETS1P54 0.00554051020280923 CD3E/IL7R/NOSIP/TCF7
AML 0.00554051020280923 IL7R/LCK/PIK3R1/TCF7
RACCACAR 0.00554051020280923 IL7R/LCK/PIK3R1/TCF7
HOXA4 0.00554051020280923 NDFIP1/PIK3R1/SYNE2/TOB1
ELK1 0.00554051020280923 FYN/IL7R/LCK/TCF7


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_9_4 D018621 PrPC Proteins 3/29 71/26076 6.71769472829521e-05 0.00123663369621951 0.00079076429172914 CD3E/FYB1/FYN 3
MeSH_gene2pubmed B_9_4 D019302 HIV Envelope Protein gp160 4/29 201/26076 6.99697422069261e-05 0.00127434253891763 0.00081487717687797 FYN/LCK/MGAT4A/PIK3R1 4
reactome B_9_4 R-HSA-6811558 PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling 4/23 111/11146 7.12882548492001e-05 0.00091090547862866 0.00047942393612035 FLT3LG/FYN/LCK/PIK3R1 4
MeSH_gene2pubmed B_9_4 D007156 Immunologic Memory 5/29 403/26076 7.52318916760974e-05 0.0013557578794682 0.00086693814230627 CD3D/CD3E/FYN/IL7R/LAT 5
MeSH_gene2pubmed B_9_4 D000938 Antigen-Presenting Cells 5/29 405/26076 7.7008075496282e-05 0.0013733106796837 0.00087816226443128 CD3E/FYB1/FYN/LAT/LCK 5
MeSH_gene2pubmed B_9_4 D016915 AIDS Vaccines 3/29 77/26076 8.55920628138622e-05 0.00150901438369562 0.00096493787447334 CD3D/CD3E/MGAT4A 3
MeSH_gene2pubmed B_9_4 D014638 Vanadates 5/29 415/26076 8.63804962629504e-05 0.00150901438369562 0.00096493787447334 DNAJB1/FYN/LAT/LCK/PIK3R1 5
MeSH_gene2pubmed B_9_4 D051380 GRB2 Adaptor Protein 5/29 416/26076 8.73640106630615e-05 0.00151077965914304 0.00096606667825182 FYB1/FYN/LAT/LCK/PIK3R1 5
reactome B_9_4 R-HSA-1433557 Signaling by SCF-KIT 3/23 43/11146 8.97610557024697e-05 0.00104043759107685 0.00054759873214571 FYN/LCK/PIK3R1 3
MeSH_gene2pubmed B_9_4 D015459 Leukemia-Lymphoma, Adult T-Cell 5/29 419/26076 9.03664820486593e-05 0.00154707417267305 0.00098927517190111 CD3D/CD3E/FYN/IL7R/LCK 5