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Selected Module: B_9_4
Module Info
| Module_Name | B_9_4 |
| Cell_Type | B |
| Name | B_9_4: CD4 TEM |
| Meta_Module | B_7 |
| Gene_Number | 29 |
Genes:
AAK1, ANXA1, CD3D, CD3E, DENND2D, DNAJB1, FLT3LG, FYB1, FYN, GIMAP4, GIMAP7, IL32, IL7R, LAT, LCK, LEPROTL1, MGAT4A, NDFIP1, NOSIP, PIK3R1, RCAN3, RNF125, SEMA4D, SORL1, SPOCK2, SYNE2, TCF7, TOB1, TSPAN14
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| STAT4 | 0.00182775675931345 | AAK1/CD3D/LAT/LEPROTL1/NDFIP1 |
| AP4 | 0.00554051020280923 | LAT/LCK/SPOCK2/TCF7 |
| PEA3 | 0.00554051020280923 | CD3E/DENND2D/LCK/SORL1 |
| CETS1P54 | 0.00554051020280923 | CD3E/IL7R/NOSIP/TCF7 |
| AML | 0.00554051020280923 | IL7R/LCK/PIK3R1/TCF7 |
| RACCACAR | 0.00554051020280923 | IL7R/LCK/PIK3R1/TCF7 |
| HOXA4 | 0.00554051020280923 | NDFIP1/PIK3R1/SYNE2/TOB1 |
| ELK1 | 0.00554051020280923 | FYN/IL7R/LCK/TCF7 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| KEGG | B_9_4 | hsa04658 | Th1 and Th2 cell differentiation | 4/17 | 93/8541 | 2.81313246005558e-05 | 0.00090020238721778 | 0.00067367119438173 | CD3D/CD3E/LAT/LCK | 4 |
| GO | B_9_4 | GO:0050870 | positive regulation of T cell activation | 5/27 | 260/18986 | 2.92358077559114e-05 | 0.00297912881032738 | 0.00200649964808992 | ANXA1/CD3E/FYN/IL7R/LCK | 5 |
| MeSH_gene2pubmed | B_9_4 | D020729 | p120 GTPase Activating Protein | 3/29 | 56/26076 | 3.29478797758813e-05 | 0.00070508462720386 | 0.0004508657232489 | FYN/LCK/PIK3R1 | 3 |
| MeSH_gene2pubmed | B_9_4 | D016655 | HIV Core Protein p24 | 4/29 | 170/26076 | 3.64634238864017e-05 | 0.00077068372461135 | 0.00049281300639191 | CD3D/CD3E/IL32/RNF125 | 4 |
| MeSH_gene2pubmed | B_9_4 | D050719 | Crk-Associated Substrate Protein | 4/29 | 171/26076 | 3.73081615086104e-05 | 0.00077892161588708 | 0.00049808071847182 | FYB1/FYN/LCK/PIK3R1 | 4 |
| KEGG | B_9_4 | hsa04640 | Hematopoietic cell lineage | 4/17 | 100/8541 | 3.7458218562785e-05 | 0.00095893039520729 | 0.00071762060825546 | CD3D/CD3E/FLT3LG/IL7R | 4 |
| MeSH_gene2pubmed | B_9_4 | D014373 | Tuberculin | 3/29 | 59/26076 | 3.85535254721271e-05 | 0.00079522452540098 | 0.00050850559912507 | ANXA1/CD3D/CD3E | 3 |
| MeSH_gene2pubmed | B_9_4 | D022461 | Caveolins | 5/29 | 351/26076 | 3.91019398017419e-05 | 0.00079693477310216 | 0.00050959921546129 | AAK1/FYN/LAT/LCK/NOSIP | 5 |
| reactome | B_9_4 | R-HSA-389356 | CD28 co-stimulation | 3/23 | 33/11146 | 4.02215011936545e-05 | 0.00061672968496937 | 0.00032459457103651 | FYN/LCK/PIK3R1 | 3 |
| MeSH_gene2pubmed | B_9_4 | D015105 | 3',5'-Cyclic-AMP Phosphodiesterases | 4/29 | 176/26076 | 4.17486771828372e-05 | 0.00083108994577927 | 0.00053143970954896 | CD3E/FYN/PIK3R1/TOB1 | 4 |