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Selected Module: B_9_3


Module Info

Module_Name B_9_3
Cell_Type B
Name B_9_3: mitochondrial protein-containing complex
Meta_Module B_3
Gene_Number 67

Genes:

ADSL, ALDOA, ATP1B3, CCND2, CCT5, CCT7, CDK4, CHCHD7, COA6, EBNA1BP2, EEF1E1, EIF3I, EIF5A, ENY2, FABP5, GADD45GIP1, GGCT, GNL2, GRWD1, HADH, HIGD1A, HSPD1, ILF2, IMP4, LDHA, LSM5, MAGOHB, MICOS10, MRPL12, MRPL16, MRPL17, MRPL18, MRPL4, MRPS25, NDUFAF8, NEDD8, NOL7, OXCT1, PAFAH1B3, PAICS, PDAP1, PDCL3, PGK1, PHB1, PKM, POLR2F, POLR2H, POLR2I, POLR2J, PPM1G, PRMT1, PSMA7, PSMF1, RBIS, RPA3, TAF9, TIMM10, TIMM13, TIMMDC1, TIPRL, TOMM22, TOMM40, TRAP1, UBA1, UQCRFS1, VBP1, VDAC2


UMAP Visualizations


UMAP for B_9_3

UMAP for B_9_3


Word Cloud

Enriched TF

Wordcloud for B_9_3
TF p.adjust Genes
TGACCTTG 0.00077214560723105 ALDOA/HIGD1A/HSPD1/TOMM40/TRAP1/UBA1/VDAC2
EPC1 0.00077214560723105 COA6/EIF5A/MRPL4/PDAP1/PKM/POLR2J/PRMT1/TIMM13
USF 0.00077214560723105 EEF1E1/EIF5A/PAICS/POLR2H/PRMT1/TIMM10/UBA1
ATF5 0.00162546136866258 ALDOA/CCT5/HSPD1/ILF2/LSM5/MRPL18/RBIS/RPA3
HIF1 0.00190031811966115 ATP1B3/CCND2/LDHA/PGK1/PRMT1/UBA1
HSF2 0.00209156428902918 CCT5/CCT7/HSPD1/MRPL18/PGK1/PHB1
MYBL1 0.00949528706847933 ALDOA/CCND2/CDK4/IMP4/PKM/RPA3/TOMM40
CASP8AP2 0.00949528706847933 COA6/HSPD1/ILF2/LSM5/MRPL16/PSMF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
GO B_9_3 GO:0007339 binding of sperm to zona pellucida 4/66 38/18986 8.99360701005916e-06 0.001026395400023 0.00083072527908704 ALDOA/CCT5/CCT7/VDAC2 4
MeSH_gene2pubmed B_9_3 D002439 Cefotaxime 5/67 110/26076 9.55922922979912e-06 0.00055317750200863 0.00046313274024705 ALDOA/HSPD1/PGK1/PHB1/VDAC2 5
reactome B_9_3 R-HSA-6803529 FGFR2 alternative splicing 4/60 26/11146 1.03812358993131e-05 0.00028790627560761 0.00018868351564365 POLR2F/POLR2H/POLR2I/POLR2J 4
MeSH_gene2pubmed B_9_3 D012377 Rodentia 8/67 412/26076 1.04839625545776e-05 0.00059113419634656 0.0004949109448841 ADSL/EIF5A/ILF2/LDHA/POLR2F/POLR2H/POLR2I/POLR2J 8
GO B_9_3 GO:0005758 mitochondrial intermembrane space 5/67 87/19960 1.0936474899177e-05 0.00012811299167607 7.81176778512642e-05 CHCHD7/COA6/TIMM10/TIMM13/TRAP1 5
KEGG B_9_3 hsa03420 Nucleotide excision repair 5/41 63/8541 1.13518131372238e-05 0.00115555407852745 0.00104547737422231 POLR2F/POLR2H/POLR2I/POLR2J/RPA3 5
GO B_9_3 GO:0140662 ATP-dependent protein folding chaperone 4/66 40/18737 1.16630712942035e-05 0.00040431980486572 0.00033966137453294 CCT5/CCT7/HSPD1/TRAP1 4
reactome B_9_3 R-HSA-167160 RNA Pol II CTD phosphorylation and interaction with CE during HIV infection 4/60 27/11146 1.21377708479688e-05 0.000297018392515 0.00019465527242253 POLR2F/POLR2H/POLR2I/POLR2J 4
reactome B_9_3 R-HSA-77075 RNA Pol II CTD phosphorylation and interaction with CE 4/60 27/11146 1.21377708479688e-05 0.000297018392515 0.00019465527242253 POLR2F/POLR2H/POLR2I/POLR2J 4
MeSH_gene2pubmed B_9_3 D035362 Transcription Factor TFIID 7/67 301/26076 1.22470905344354e-05 0.00067328380213058 0.00056368845644019 CDK4/ENY2/POLR2F/POLR2H/POLR2I/POLR2J/TAF9 7