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Selected Module: B_9_3


Module Info

Module_Name B_9_3
Cell_Type B
Name B_9_3: mitochondrial protein-containing complex
Meta_Module B_3
Gene_Number 67

Genes:

ADSL, ALDOA, ATP1B3, CCND2, CCT5, CCT7, CDK4, CHCHD7, COA6, EBNA1BP2, EEF1E1, EIF3I, EIF5A, ENY2, FABP5, GADD45GIP1, GGCT, GNL2, GRWD1, HADH, HIGD1A, HSPD1, ILF2, IMP4, LDHA, LSM5, MAGOHB, MICOS10, MRPL12, MRPL16, MRPL17, MRPL18, MRPL4, MRPS25, NDUFAF8, NEDD8, NOL7, OXCT1, PAFAH1B3, PAICS, PDAP1, PDCL3, PGK1, PHB1, PKM, POLR2F, POLR2H, POLR2I, POLR2J, PPM1G, PRMT1, PSMA7, PSMF1, RBIS, RPA3, TAF9, TIMM10, TIMM13, TIMMDC1, TIPRL, TOMM22, TOMM40, TRAP1, UBA1, UQCRFS1, VBP1, VDAC2


UMAP Visualizations


UMAP for B_9_3

UMAP for B_9_3


Word Cloud

Enriched TF

Wordcloud for B_9_3
TF p.adjust Genes
TGACCTTG 0.00077214560723105 ALDOA/HIGD1A/HSPD1/TOMM40/TRAP1/UBA1/VDAC2
EPC1 0.00077214560723105 COA6/EIF5A/MRPL4/PDAP1/PKM/POLR2J/PRMT1/TIMM13
USF 0.00077214560723105 EEF1E1/EIF5A/PAICS/POLR2H/PRMT1/TIMM10/UBA1
ATF5 0.00162546136866258 ALDOA/CCT5/HSPD1/ILF2/LSM5/MRPL18/RBIS/RPA3
HIF1 0.00190031811966115 ATP1B3/CCND2/LDHA/PGK1/PRMT1/UBA1
HSF2 0.00209156428902918 CCT5/CCT7/HSPD1/MRPL18/PGK1/PHB1
MYBL1 0.00949528706847933 ALDOA/CCND2/CDK4/IMP4/PKM/RPA3/TOMM40
CASP8AP2 0.00949528706847933 COA6/HSPD1/ILF2/LSM5/MRPL16/PSMF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
GO B_9_3 GO:0061077 chaperone-mediated protein folding 5/66 76/18986 6.64380042896384e-06 0.00086654139880628 0.00070134554904249 CCT5/CCT7/PDCL3/TRAP1/VBP1 5
MeSH_gene2pubmed B_9_3 D051528 Guanylate Kinases 8/67 387/26076 6.65320135082231e-06 0.00045110504622523 0.00037767536719941 ALDOA/CCT5/EIF3I/EIF5A/GADD45GIP1/LDHA/LSM5/PKM 8
GO B_9_3 GO:0001055 RNA polymerase II activity 3/66 11/18737 6.75026050987199e-06 0.00028081083721067 0.00023590384097657 POLR2F/POLR2H/POLR2J 3
MeSH_gene2pubmed B_9_3 D009428 Netilmicin 5/67 103/26076 6.93265271530502e-06 0.00045110504622523 0.00037767536719941 ALDOA/HSPD1/PGK1/PHB1/VDAC2 5
MeSH_gene2pubmed B_9_3 D004271 DNA, Fungal 7/67 276/26076 6.97479380248208e-06 0.00045110504622523 0.00037767536719941 EIF5A/PAICS/POLR2F/POLR2H/POLR2I/POLR2J/RPA3 7
reactome B_9_3 R-HSA-203927 MicroRNA (miRNA) biogenesis 4/60 24/11146 7.43824193882458e-06 0.00022102204618221 0.00014484997459816 POLR2F/POLR2H/POLR2I/POLR2J 4
GO B_9_3 GO:0061695 transferase complex, transferring phosphorus-containing groups 8/67 302/19960 7.52686805916989e-06 9.49543355156816e-05 5.78989850705376e-05 CCND2/CDK4/ENY2/POLR2F/POLR2H/POLR2I/POLR2J/TAF9 8
MeSH_gene2pubmed B_9_3 D010441 Peptide Chain Elongation, Translational 5/67 106/26076 7.9779866292348e-06 0.00050124550279106 0.00041965409367012 EIF5A/POLR2F/POLR2H/POLR2I/POLR2J 5
MeSH_gene2pubmed B_9_3 D000746 Anemia, Hemolytic, Congenital Nonspherocytic 3/67 16/26076 8.86440293767203e-06 0.00053376009738416 0.00044687604907728 ALDOA/PGK1/PKM 3
MeSH_gene2pubmed B_9_3 D012331 RNA, Fungal 6/67 188/26076 8.98095661810557e-06 0.00053376009738416 0.00044687604907728 EIF5A/POLR2F/POLR2H/POLR2I/POLR2J/PRMT1 6