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Selected Module: B_9_3
Module Info
| Module_Name | B_9_3 |
| Cell_Type | B |
| Name | B_9_3: mitochondrial protein-containing complex |
| Meta_Module | B_3 |
| Gene_Number | 67 |
Genes:
ADSL, ALDOA, ATP1B3, CCND2, CCT5, CCT7, CDK4, CHCHD7, COA6, EBNA1BP2, EEF1E1, EIF3I, EIF5A, ENY2, FABP5, GADD45GIP1, GGCT, GNL2, GRWD1, HADH, HIGD1A, HSPD1, ILF2, IMP4, LDHA, LSM5, MAGOHB, MICOS10, MRPL12, MRPL16, MRPL17, MRPL18, MRPL4, MRPS25, NDUFAF8, NEDD8, NOL7, OXCT1, PAFAH1B3, PAICS, PDAP1, PDCL3, PGK1, PHB1, PKM, POLR2F, POLR2H, POLR2I, POLR2J, PPM1G, PRMT1, PSMA7, PSMF1, RBIS, RPA3, TAF9, TIMM10, TIMM13, TIMMDC1, TIPRL, TOMM22, TOMM40, TRAP1, UBA1, UQCRFS1, VBP1, VDAC2
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGACCTTG | 0.00077214560723105 | ALDOA/HIGD1A/HSPD1/TOMM40/TRAP1/UBA1/VDAC2 |
| EPC1 | 0.00077214560723105 | COA6/EIF5A/MRPL4/PDAP1/PKM/POLR2J/PRMT1/TIMM13 |
| USF | 0.00077214560723105 | EEF1E1/EIF5A/PAICS/POLR2H/PRMT1/TIMM10/UBA1 |
| ATF5 | 0.00162546136866258 | ALDOA/CCT5/HSPD1/ILF2/LSM5/MRPL18/RBIS/RPA3 |
| HIF1 | 0.00190031811966115 | ATP1B3/CCND2/LDHA/PGK1/PRMT1/UBA1 |
| HSF2 | 0.00209156428902918 | CCT5/CCT7/HSPD1/MRPL18/PGK1/PHB1 |
| MYBL1 | 0.00949528706847933 | ALDOA/CCND2/CDK4/IMP4/PKM/RPA3/TOMM40 |
| CASP8AP2 | 0.00949528706847933 | COA6/HSPD1/ILF2/LSM5/MRPL16/PSMF1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_9_3 | D042925 | Positive Transcriptional Elongation Factor B | 6/67 | 154/26076 | 2.85282346289957e-06 | 0.00023234662203393 | 0.00019452585717783 | CDK4/POLR2F/POLR2H/POLR2I/POLR2J/PRMT1 | 6 |
| GO | B_9_3 | GO:0044391 | ribosomal subunit | 7/67 | 186/19960 | 2.95677185374592e-06 | 4.04092153345276e-05 | 2.46397654478827e-05 | GADD45GIP1/MRPL12/MRPL16/MRPL17/MRPL18/MRPL4/MRPS25 | 7 |
| MeSH_gene2pubmed | B_9_3 | D035602 | Transcriptional Elongation Factors | 6/67 | 157/26076 | 3.18980811986431e-06 | 0.00025051385912791 | 0.000209735879761 | CHCHD7/POLR2F/POLR2H/POLR2I/POLR2J/PRMT1 | 6 |
| GO | B_9_3 | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | 4/66 | 30/18737 | 3.59115842596206e-06 | 0.00028081083721067 | 0.00023590384097657 | POLR2F/POLR2H/POLR2I/POLR2J | 4 |
| GO | B_9_3 | GO:0007006 | mitochondrial membrane organization | 6/66 | 120/18986 | 3.74815793533821e-06 | 0.00072484186913653 | 0.00058665935566247 | MICOS10/TIMM10/TIMM13/TOMM22/TOMM40/VDAC2 | 6 |
| GO | B_9_3 | GO:0006839 | mitochondrial transport | 7/66 | 188/18986 | 3.96956116723186e-06 | 0.00072484186913653 | 0.00058665935566247 | HSPD1/MRPL18/TIMM10/TIMM13/TOMM22/TOMM40/VDAC2 | 7 |
| GO | B_9_3 | GO:0034062 | 5'-3' RNA polymerase activity | 4/66 | 32/18737 | 4.6873319142262e-06 | 0.00028081083721067 | 0.00023590384097657 | POLR2F/POLR2H/POLR2I/POLR2J | 4 |
| GO | B_9_3 | GO:0097747 | RNA polymerase activity | 4/66 | 32/18737 | 4.6873319142262e-06 | 0.00028081083721067 | 0.00023590384097657 | POLR2F/POLR2H/POLR2I/POLR2J | 4 |
| reactome | B_9_3 | R-HSA-167161 | HIV Transcription Initiation | 5/60 | 47/11146 | 4.92003982845704e-06 | 0.00017056138071984 | 0.00011177985224301 | POLR2F/POLR2H/POLR2I/POLR2J/TAF9 | 5 |
| reactome | B_9_3 | R-HSA-167162 | RNA Polymerase II HIV Promoter Escape | 5/60 | 47/11146 | 4.92003982845704e-06 | 0.00017056138071984 | 0.00011177985224301 | POLR2F/POLR2H/POLR2I/POLR2J/TAF9 | 5 |