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Selected Module: B_9_3


Module Info

Module_Name B_9_3
Cell_Type B
Name B_9_3: mitochondrial protein-containing complex
Meta_Module B_3
Gene_Number 67

Genes:

ADSL, ALDOA, ATP1B3, CCND2, CCT5, CCT7, CDK4, CHCHD7, COA6, EBNA1BP2, EEF1E1, EIF3I, EIF5A, ENY2, FABP5, GADD45GIP1, GGCT, GNL2, GRWD1, HADH, HIGD1A, HSPD1, ILF2, IMP4, LDHA, LSM5, MAGOHB, MICOS10, MRPL12, MRPL16, MRPL17, MRPL18, MRPL4, MRPS25, NDUFAF8, NEDD8, NOL7, OXCT1, PAFAH1B3, PAICS, PDAP1, PDCL3, PGK1, PHB1, PKM, POLR2F, POLR2H, POLR2I, POLR2J, PPM1G, PRMT1, PSMA7, PSMF1, RBIS, RPA3, TAF9, TIMM10, TIMM13, TIMMDC1, TIPRL, TOMM22, TOMM40, TRAP1, UBA1, UQCRFS1, VBP1, VDAC2


UMAP Visualizations


UMAP for B_9_3

UMAP for B_9_3


Word Cloud

Enriched TF

Wordcloud for B_9_3
TF p.adjust Genes
TGACCTTG 0.00077214560723105 ALDOA/HIGD1A/HSPD1/TOMM40/TRAP1/UBA1/VDAC2
EPC1 0.00077214560723105 COA6/EIF5A/MRPL4/PDAP1/PKM/POLR2J/PRMT1/TIMM13
USF 0.00077214560723105 EEF1E1/EIF5A/PAICS/POLR2H/PRMT1/TIMM10/UBA1
ATF5 0.00162546136866258 ALDOA/CCT5/HSPD1/ILF2/LSM5/MRPL18/RBIS/RPA3
HIF1 0.00190031811966115 ATP1B3/CCND2/LDHA/PGK1/PRMT1/UBA1
HSF2 0.00209156428902918 CCT5/CCT7/HSPD1/MRPL18/PGK1/PHB1
MYBL1 0.00949528706847933 ALDOA/CCND2/CDK4/IMP4/PKM/RPA3/TOMM40
CASP8AP2 0.00949528706847933 COA6/HSPD1/ILF2/LSM5/MRPL16/PSMF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_9_3 D034802 RNA-Binding Protein EWS 6/67 116/26076 5.44171018448636e-07 7.97754713045701e-05 6.67898323695905e-05 POLR2F/POLR2H/POLR2I/POLR2J/PRMT1/TAF9 6
reactome B_9_3 R-HSA-5368287 Mitochondrial translation 7/60 93/11146 6.03745525607542e-07 5.02316277305475e-05 3.29200191857586e-05 GADD45GIP1/MRPL12/MRPL16/MRPL17/MRPL18/MRPL4/MRPS25 7
MeSH_gene2pubmed B_9_3 D019892 eIF-2 Kinase 8/67 283/26076 6.5326489756212e-07 8.97830943586938e-05 7.51684411734307e-05 EIF5A/ILF2/POLR2F/POLR2H/POLR2I/POLR2J/PRMT1/UBA1 8
MeSH_gene2pubmed B_9_3 D005095 Exoribonucleases 8/67 287/26076 7.2603342949976e-07 9.14212174034819e-05 7.65399149080634e-05 ALDOA/CCT5/EIF3I/EIF5A/GADD45GIP1/LDHA/LSM5/PKM 8
MeSH_gene2pubmed B_9_3 D028361 Mitochondrial Diseases 7/67 197/26076 7.48331929632867e-07 9.14212174034819e-05 7.65399149080634e-05 MRPL12/MRPL16/MRPL17/MRPL18/MRPL4/MRPS25/PHB1 7
MeSH_gene2pubmed B_9_3 D012521 Sarcosine 5/67 67/26076 8.2131748383791e-07 9.50566919452402e-05 7.95836165779781e-05 POLR2F/POLR2H/POLR2I/POLR2J/TAF9 5
MeSH_gene2pubmed B_9_3 D012321 DNA-Directed RNA Polymerases 7/67 205/26076 9.77123541803381e-07 0.00010743473342128 8.99467934007428e-05 MRPL12/POLR2F/POLR2H/POLR2I/POLR2J/TAF9/TIMMDC1 7
WikiPathways B_9_3 WP405 Eukaryotic transcription initiation 5/41 42/8836 1.25368223433857e-06 5.55799123890099e-05 4.39888503276691e-05 POLR2F/POLR2H/POLR2I/POLR2J/TAF9 5
MeSH_gene2pubmed B_9_3 D035165 Transcription Factors, General 5/67 74/26076 1.35107976592308e-06 0.00014147735263166 0.00011844804564408 ENY2/POLR2F/POLR2H/POLR2I/POLR2J 5
MeSH_gene2pubmed B_9_3 D003838 Deoxyadenine Nucleotides 5/67 75/26076 1.44472161515876e-06 0.00014440649235155 0.00012090038779486 HSPD1/POLR2F/POLR2H/POLR2I/POLR2J 5