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Selected Module: B_9_3
Module Info
| Module_Name | B_9_3 |
| Cell_Type | B |
| Name | B_9_3: mitochondrial protein-containing complex |
| Meta_Module | B_3 |
| Gene_Number | 67 |
Genes:
ADSL, ALDOA, ATP1B3, CCND2, CCT5, CCT7, CDK4, CHCHD7, COA6, EBNA1BP2, EEF1E1, EIF3I, EIF5A, ENY2, FABP5, GADD45GIP1, GGCT, GNL2, GRWD1, HADH, HIGD1A, HSPD1, ILF2, IMP4, LDHA, LSM5, MAGOHB, MICOS10, MRPL12, MRPL16, MRPL17, MRPL18, MRPL4, MRPS25, NDUFAF8, NEDD8, NOL7, OXCT1, PAFAH1B3, PAICS, PDAP1, PDCL3, PGK1, PHB1, PKM, POLR2F, POLR2H, POLR2I, POLR2J, PPM1G, PRMT1, PSMA7, PSMF1, RBIS, RPA3, TAF9, TIMM10, TIMM13, TIMMDC1, TIPRL, TOMM22, TOMM40, TRAP1, UBA1, UQCRFS1, VBP1, VDAC2
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGACCTTG | 0.00077214560723105 | ALDOA/HIGD1A/HSPD1/TOMM40/TRAP1/UBA1/VDAC2 |
| EPC1 | 0.00077214560723105 | COA6/EIF5A/MRPL4/PDAP1/PKM/POLR2J/PRMT1/TIMM13 |
| USF | 0.00077214560723105 | EEF1E1/EIF5A/PAICS/POLR2H/PRMT1/TIMM10/UBA1 |
| ATF5 | 0.00162546136866258 | ALDOA/CCT5/HSPD1/ILF2/LSM5/MRPL18/RBIS/RPA3 |
| HIF1 | 0.00190031811966115 | ATP1B3/CCND2/LDHA/PGK1/PRMT1/UBA1 |
| HSF2 | 0.00209156428902918 | CCT5/CCT7/HSPD1/MRPL18/PGK1/PHB1 |
| MYBL1 | 0.00949528706847933 | ALDOA/CCND2/CDK4/IMP4/PKM/RPA3/TOMM40 |
| CASP8AP2 | 0.00949528706847933 | COA6/HSPD1/ILF2/LSM5/MRPL16/PSMF1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_9_3 | R-HSA-5619507 | Activation of HOX genes during differentiation | 4/60 | 121/11146 | 0.0040339804710531 | 0.0219618065930523 | 0.0143929855961553 | POLR2F/POLR2H/POLR2I/POLR2J | 4 |
| reactome | B_9_3 | R-HSA-187577 | SCF(Skp2)-mediated degradation of p27/p21 | 3/60 | 60/11146 | 0.0040815556396835 | 0.0219618065930523 | 0.0143929855961553 | CDK4/PSMA7/PSMF1 | 3 |
| reactome | B_9_3 | R-HSA-73780 | RNA Polymerase III Chain Elongation | 2/60 | 18/11146 | 0.00412487368306937 | 0.0219618065930523 | 0.0143929855961553 | POLR2F/POLR2H | 2 |
| reactome | B_9_3 | R-HSA-72203 | Processing of Capped Intron-Containing Pre-mRNA | 6/60 | 285/11146 | 0.00417063154050754 | 0.0219618065930523 | 0.0143929855961553 | LSM5/MAGOHB/POLR2F/POLR2H/POLR2I/POLR2J | 6 |
| GO | B_9_3 | GO:0006163 | purine nucleotide metabolic process | 6/66 | 440/18986 | 0.00421087396132014 | 0.0455349249754966 | 0.036854231086411 | ADSL/ALDOA/LDHA/PAICS/PGK1/PKM | 6 |
| GO | B_9_3 | GO:2001242 | regulation of intrinsic apoptotic signaling pathway | 4/66 | 189/18986 | 0.0042392865530309 | 0.0455349249754966 | 0.036854231086411 | EIF5A/TAF9/TRAP1/VDAC2 | 4 |
| GO | B_9_3 | GO:1904358 | positive regulation of telomere maintenance via telomere lengthening | 2/66 | 29/18986 | 0.00454819495277417 | 0.0482849068823583 | 0.0390799615281208 | CCT5/CCT7 | 2 |
| WikiPathways | B_9_3 | WP4224 | Purine metabolism and related disorders | 2/41 | 23/8836 | 0.00499686194047562 | 0.0489771688132401 | 0.0387630936392878 | ADSL/PAICS | 2 |
| WikiPathways | B_9_3 | WP4949 | 16p11 2 proximal deletion syndrome | 3/41 | 76/8836 | 0.00515549145402528 | 0.0489771688132401 | 0.0387630936392878 | ALDOA/CCT5/CCT7 | 3 |
| reactome | B_9_3 | R-HSA-9006931 | Signaling by Nuclear Receptors | 6/60 | 298/11146 | 0.00517711115884586 | 0.0269209780259985 | 0.0176430498702773 | FABP5/POLR2F/POLR2H/POLR2I/POLR2J/PRMT1 | 6 |