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Selected Module: B_9_3
Module Info
| Module_Name | B_9_3 |
| Cell_Type | B |
| Name | B_9_3: mitochondrial protein-containing complex |
| Meta_Module | B_3 |
| Gene_Number | 67 |
Genes:
ADSL, ALDOA, ATP1B3, CCND2, CCT5, CCT7, CDK4, CHCHD7, COA6, EBNA1BP2, EEF1E1, EIF3I, EIF5A, ENY2, FABP5, GADD45GIP1, GGCT, GNL2, GRWD1, HADH, HIGD1A, HSPD1, ILF2, IMP4, LDHA, LSM5, MAGOHB, MICOS10, MRPL12, MRPL16, MRPL17, MRPL18, MRPL4, MRPS25, NDUFAF8, NEDD8, NOL7, OXCT1, PAFAH1B3, PAICS, PDAP1, PDCL3, PGK1, PHB1, PKM, POLR2F, POLR2H, POLR2I, POLR2J, PPM1G, PRMT1, PSMA7, PSMF1, RBIS, RPA3, TAF9, TIMM10, TIMM13, TIMMDC1, TIPRL, TOMM22, TOMM40, TRAP1, UBA1, UQCRFS1, VBP1, VDAC2
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGACCTTG | 0.00077214560723105 | ALDOA/HIGD1A/HSPD1/TOMM40/TRAP1/UBA1/VDAC2 |
| EPC1 | 0.00077214560723105 | COA6/EIF5A/MRPL4/PDAP1/PKM/POLR2J/PRMT1/TIMM13 |
| USF | 0.00077214560723105 | EEF1E1/EIF5A/PAICS/POLR2H/PRMT1/TIMM10/UBA1 |
| ATF5 | 0.00162546136866258 | ALDOA/CCT5/HSPD1/ILF2/LSM5/MRPL18/RBIS/RPA3 |
| HIF1 | 0.00190031811966115 | ATP1B3/CCND2/LDHA/PGK1/PRMT1/UBA1 |
| HSF2 | 0.00209156428902918 | CCT5/CCT7/HSPD1/MRPL18/PGK1/PHB1 |
| MYBL1 | 0.00949528706847933 | ALDOA/CCND2/CDK4/IMP4/PKM/RPA3/TOMM40 |
| CASP8AP2 | 0.00949528706847933 | COA6/HSPD1/ILF2/LSM5/MRPL16/PSMF1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_9_3 | GO:0101002 | ficolin-1-rich granule | 4/67 | 185/19960 | 0.00347495175201193 | 0.0203532888332127 | 0.0124105419714712 | ALDOA/ILF2/PDAP1/PKM | 4 |
| GO | B_9_3 | GO:0016052 | carbohydrate catabolic process | 4/66 | 180/18986 | 0.00356393454254164 | 0.0411882561688673 | 0.0333362031827346 | ALDOA/LDHA/PGK1/PKM | 4 |
| GO | B_9_3 | GO:0032212 | positive regulation of telomere maintenance via telomerase | 2/66 | 26/18986 | 0.0036653041235373 | 0.0418302833098695 | 0.0338558354568841 | CCT5/CCT7 | 2 |
| reactome | B_9_3 | R-HSA-9659787 | Aberrant regulation of mitotic G1/S transition in cancer due to RB1 defects | 2/60 | 17/11146 | 0.00367924933101618 | 0.0206833475905774 | 0.0135551291142701 | CCND2/CDK4 | 2 |
| reactome | B_9_3 | R-HSA-9661069 | Defective binding of RB1 mutants to E2F1,(E2F2, E2F3) | 2/60 | 17/11146 | 0.00367924933101618 | 0.0206833475905774 | 0.0135551291142701 | CCND2/CDK4 | 2 |
| GO | B_9_3 | GO:0000124 | SAGA complex | 2/67 | 27/19960 | 0.00369057422871823 | 0.0208708335693031 | 0.0127261180300629 | ENY2/TAF9 | 2 |
| GO | B_9_3 | GO:1901292 | nucleoside phosphate catabolic process | 4/66 | 184/18986 | 0.00385428109081655 | 0.0434439337767347 | 0.0351618625828878 | ALDOA/LDHA/PGK1/PKM | 4 |
| GO | B_9_3 | GO:0006007 | glucose catabolic process | 2/66 | 27/18986 | 0.00394968376222636 | 0.0434465213844899 | 0.0351639568938859 | PGK1/PKM | 2 |
| GO | B_9_3 | GO:0046037 | GMP metabolic process | 2/66 | 27/18986 | 0.00394968376222636 | 0.0434465213844899 | 0.0351639568938859 | ADSL/PAICS | 2 |
| reactome | B_9_3 | R-HSA-5617472 | Activation of anterior HOX genes in hindbrain development during early embryogenesis | 4/60 | 121/11146 | 0.0040339804710531 | 0.0219618065930523 | 0.0143929855961553 | POLR2F/POLR2H/POLR2I/POLR2J | 4 |