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Selected Module: B_9_3
Module Info
| Module_Name | B_9_3 |
| Cell_Type | B |
| Name | B_9_3: mitochondrial protein-containing complex |
| Meta_Module | B_3 |
| Gene_Number | 67 |
Genes:
ADSL, ALDOA, ATP1B3, CCND2, CCT5, CCT7, CDK4, CHCHD7, COA6, EBNA1BP2, EEF1E1, EIF3I, EIF5A, ENY2, FABP5, GADD45GIP1, GGCT, GNL2, GRWD1, HADH, HIGD1A, HSPD1, ILF2, IMP4, LDHA, LSM5, MAGOHB, MICOS10, MRPL12, MRPL16, MRPL17, MRPL18, MRPL4, MRPS25, NDUFAF8, NEDD8, NOL7, OXCT1, PAFAH1B3, PAICS, PDAP1, PDCL3, PGK1, PHB1, PKM, POLR2F, POLR2H, POLR2I, POLR2J, PPM1G, PRMT1, PSMA7, PSMF1, RBIS, RPA3, TAF9, TIMM10, TIMM13, TIMMDC1, TIPRL, TOMM22, TOMM40, TRAP1, UBA1, UQCRFS1, VBP1, VDAC2
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGACCTTG | 0.00077214560723105 | ALDOA/HIGD1A/HSPD1/TOMM40/TRAP1/UBA1/VDAC2 |
| EPC1 | 0.00077214560723105 | COA6/EIF5A/MRPL4/PDAP1/PKM/POLR2J/PRMT1/TIMM13 |
| USF | 0.00077214560723105 | EEF1E1/EIF5A/PAICS/POLR2H/PRMT1/TIMM10/UBA1 |
| ATF5 | 0.00162546136866258 | ALDOA/CCT5/HSPD1/ILF2/LSM5/MRPL18/RBIS/RPA3 |
| HIF1 | 0.00190031811966115 | ATP1B3/CCND2/LDHA/PGK1/PRMT1/UBA1 |
| HSF2 | 0.00209156428902918 | CCT5/CCT7/HSPD1/MRPL18/PGK1/PHB1 |
| MYBL1 | 0.00949528706847933 | ALDOA/CCND2/CDK4/IMP4/PKM/RPA3/TOMM40 |
| CASP8AP2 | 0.00949528706847933 | COA6/HSPD1/ILF2/LSM5/MRPL16/PSMF1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_9_3 | GO:0071806 | protein transmembrane transport | 3/66 | 74/18986 | 0.00218090959108975 | 0.0288575428502165 | 0.0233561942478261 | HSPD1/TOMM22/TOMM40 | 3 |
| GO | B_9_3 | GO:1903051 | negative regulation of proteolysis involved in protein catabolic process | 3/66 | 74/18986 | 0.00218090959108975 | 0.0288575428502165 | 0.0233561942478261 | PDCL3/PSMF1/TAF9 | 3 |
| GO | B_9_3 | GO:0009166 | nucleotide catabolic process | 4/66 | 161/18986 | 0.00238638920896436 | 0.030370019512826 | 0.0245803351565156 | ALDOA/LDHA/PGK1/PKM | 4 |
| GO | B_9_3 | GO:0009127 | purine nucleoside monophosphate biosynthetic process | 2/66 | 21/18986 | 0.00239500701525024 | 0.030370019512826 | 0.0245803351565156 | ADSL/PAICS | 2 |
| GO | B_9_3 | GO:0019677 | NAD catabolic process | 2/66 | 21/18986 | 0.00239500701525024 | 0.030370019512826 | 0.0245803351565156 | PGK1/PKM | 2 |
| reactome | B_9_3 | R-HSA-5578749 | Transcriptional regulation by small RNAs | 4/60 | 105/11146 | 0.00241922285593739 | 0.0145854595372457 | 0.00955879053680829 | POLR2F/POLR2H/POLR2I/POLR2J | 4 |
| MeSH_gene2pubmed | B_9_3 | D017500 | Adenovirus E1A Proteins | 5/67 | 365/26076 | 0.0024816512320272 | 0.0436572084738224 | 0.0365508042510785 | CDK4/POLR2F/POLR2H/POLR2I/POLR2J | 5 |
| reactome | B_9_3 | R-HSA-8956320 | Nucleotide biosynthesis | 2/60 | 14/11146 | 0.00248753018893844 | 0.0147830365514056 | 0.0096882754727076 | ADSL/PAICS | 2 |
| MeSH_gene2pubmed | B_9_3 | D018316 | Gliosarcoma | 2/67 | 29/26076 | 0.0025247663801394 | 0.0440631846819566 | 0.0368906967323626 | CCND2/CDK4 | 2 |
| MeSH_gene2pubmed | B_9_3 | D050720 | Retinoblastoma-Like Protein p107 | 3/67 | 106/26076 | 0.00258944611027421 | 0.0448361574527006 | 0.0375378470523795 | CCND2/CDK4/PHB1 | 3 |