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Selected Module: B_9_3


Module Info

Module_Name B_9_3
Cell_Type B
Name B_9_3: mitochondrial protein-containing complex
Meta_Module B_3
Gene_Number 67

Genes:

ADSL, ALDOA, ATP1B3, CCND2, CCT5, CCT7, CDK4, CHCHD7, COA6, EBNA1BP2, EEF1E1, EIF3I, EIF5A, ENY2, FABP5, GADD45GIP1, GGCT, GNL2, GRWD1, HADH, HIGD1A, HSPD1, ILF2, IMP4, LDHA, LSM5, MAGOHB, MICOS10, MRPL12, MRPL16, MRPL17, MRPL18, MRPL4, MRPS25, NDUFAF8, NEDD8, NOL7, OXCT1, PAFAH1B3, PAICS, PDAP1, PDCL3, PGK1, PHB1, PKM, POLR2F, POLR2H, POLR2I, POLR2J, PPM1G, PRMT1, PSMA7, PSMF1, RBIS, RPA3, TAF9, TIMM10, TIMM13, TIMMDC1, TIPRL, TOMM22, TOMM40, TRAP1, UBA1, UQCRFS1, VBP1, VDAC2


UMAP Visualizations


UMAP for B_9_3

UMAP for B_9_3


Word Cloud

Enriched TF

Wordcloud for B_9_3
TF p.adjust Genes
TGACCTTG 0.00077214560723105 ALDOA/HIGD1A/HSPD1/TOMM40/TRAP1/UBA1/VDAC2
EPC1 0.00077214560723105 COA6/EIF5A/MRPL4/PDAP1/PKM/POLR2J/PRMT1/TIMM13
USF 0.00077214560723105 EEF1E1/EIF5A/PAICS/POLR2H/PRMT1/TIMM10/UBA1
ATF5 0.00162546136866258 ALDOA/CCT5/HSPD1/ILF2/LSM5/MRPL18/RBIS/RPA3
HIF1 0.00190031811966115 ATP1B3/CCND2/LDHA/PGK1/PRMT1/UBA1
HSF2 0.00209156428902918 CCT5/CCT7/HSPD1/MRPL18/PGK1/PHB1
MYBL1 0.00949528706847933 ALDOA/CCND2/CDK4/IMP4/PKM/RPA3/TOMM40
CASP8AP2 0.00949528706847933 COA6/HSPD1/ILF2/LSM5/MRPL16/PSMF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
GO B_9_3 GO:0042254 ribosome biogenesis 6/66 317/18986 0.00080938809455477 0.0184742832582128 0.0149523800625646 EBNA1BP2/GNL2/GRWD1/IMP4/NOL7/RBIS 6
MeSH_gene2pubmed B_9_3 D050994 Voltage-Dependent Anion Channels 3/67 71/26076 0.00081783627733358 0.0168076819986593 0.0140717722484647 TIMM13/TOMM22/VDAC2 3
reactome B_9_3 R-HSA-72163 mRNA Splicing - Major Pathway 6/60 207/11146 0.00082899787567153 0.00594591579791995 0.0038967413756611 LSM5/MAGOHB/POLR2F/POLR2H/POLR2I/POLR2J 6
GO B_9_3 GO:0005736 RNA polymerase I complex 2/67 13/19960 0.00084536155447624 0.0063017861333684 0.00384255252034658 POLR2F/POLR2H 2
GO B_9_3 GO:0006167 AMP biosynthetic process 2/66 13/18986 0.00090567402250906 0.0196876281559708 0.0159344151328662 ADSL/PAICS 2
GO B_9_3 GO:0045039 protein insertion into mitochondrial inner membrane 2/66 13/18986 0.00090567402250906 0.0196876281559708 0.0159344151328662 TIMM10/TIMM13 2
reactome B_9_3 R-HSA-73886 Chromosome Maintenance 5/60 140/11146 0.00091297633383986 0.00643725686232857 0.00421874880400582 POLR2F/POLR2H/POLR2I/POLR2J/RPA3 5
GO B_9_3 GO:1905368 peptidase complex 4/67 129/19960 0.00093165663702908 0.0066431168901204 0.00405068103056122 ENY2/PSMA7/PSMF1/TAF9 4
MeSH_gene2pubmed B_9_3 D008780 Methyltransferases 6/67 441/26076 0.00094490628962711 0.0192393419526854 0.0161076130658657 POLR2F/POLR2H/POLR2I/POLR2J/PRMT1/UBA1 6
GO B_9_3 GO:0006090 pyruvate metabolic process 4/66 126/18986 0.00096989622177635 0.0197236470691172 0.0159635674670205 ALDOA/LDHA/PGK1/PKM 4