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Selected Module: B_9_3
Module Info
| Module_Name | B_9_3 |
| Cell_Type | B |
| Name | B_9_3: mitochondrial protein-containing complex |
| Meta_Module | B_3 |
| Gene_Number | 67 |
Genes:
ADSL, ALDOA, ATP1B3, CCND2, CCT5, CCT7, CDK4, CHCHD7, COA6, EBNA1BP2, EEF1E1, EIF3I, EIF5A, ENY2, FABP5, GADD45GIP1, GGCT, GNL2, GRWD1, HADH, HIGD1A, HSPD1, ILF2, IMP4, LDHA, LSM5, MAGOHB, MICOS10, MRPL12, MRPL16, MRPL17, MRPL18, MRPL4, MRPS25, NDUFAF8, NEDD8, NOL7, OXCT1, PAFAH1B3, PAICS, PDAP1, PDCL3, PGK1, PHB1, PKM, POLR2F, POLR2H, POLR2I, POLR2J, PPM1G, PRMT1, PSMA7, PSMF1, RBIS, RPA3, TAF9, TIMM10, TIMM13, TIMMDC1, TIPRL, TOMM22, TOMM40, TRAP1, UBA1, UQCRFS1, VBP1, VDAC2
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGACCTTG | 0.00077214560723105 | ALDOA/HIGD1A/HSPD1/TOMM40/TRAP1/UBA1/VDAC2 |
| EPC1 | 0.00077214560723105 | COA6/EIF5A/MRPL4/PDAP1/PKM/POLR2J/PRMT1/TIMM13 |
| USF | 0.00077214560723105 | EEF1E1/EIF5A/PAICS/POLR2H/PRMT1/TIMM10/UBA1 |
| ATF5 | 0.00162546136866258 | ALDOA/CCT5/HSPD1/ILF2/LSM5/MRPL18/RBIS/RPA3 |
| HIF1 | 0.00190031811966115 | ATP1B3/CCND2/LDHA/PGK1/PRMT1/UBA1 |
| HSF2 | 0.00209156428902918 | CCT5/CCT7/HSPD1/MRPL18/PGK1/PHB1 |
| MYBL1 | 0.00949528706847933 | ALDOA/CCND2/CDK4/IMP4/PKM/RPA3/TOMM40 |
| CASP8AP2 | 0.00949528706847933 | COA6/HSPD1/ILF2/LSM5/MRPL16/PSMF1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_9_3 | R-HSA-5205685 | PINK1-PRKN Mediated Mitophagy | 3/60 | 33/11146 | 0.00072130836964263 | 0.00535829074591672 | 0.00351163285220757 | TOMM22/TOMM40/VDAC2 | 3 |
| MeSH_gene2pubmed | B_9_3 | D005987 | Glyceraldehyde-3-Phosphate Dehydrogenases | 6/67 | 420/26076 | 0.00073403387173376 | 0.0155205815763707 | 0.0129941826079186 | ALDOA/CDK4/HSPD1/LDHA/NEDD8/PGK1 | 6 |
| MeSH_gene2pubmed | B_9_3 | D000332 | Aerobiosis | 3/67 | 69/26076 | 0.00075246128920366 | 0.0156997603231766 | 0.0131441951151173 | CCND2/CDK4/EIF5A | 3 |
| MeSH_gene2pubmed | B_9_3 | D004023 | Dictyostelium | 4/67 | 159/26076 | 0.00075678699147645 | 0.0156997603231766 | 0.0131441951151173 | CCND2/EIF5A/PHB1/TRAP1 | 4 |
| GO | B_9_3 | GO:1903405 | protein localization to nuclear body | 2/66 | 12/18986 | 0.00076806158804459 | 0.0179805187149928 | 0.0145527458787397 | CCT5/CCT7 | 2 |
| GO | B_9_3 | GO:1904867 | protein localization to Cajal body | 2/66 | 12/18986 | 0.00076806158804459 | 0.0179805187149928 | 0.0145527458787397 | CCT5/CCT7 | 2 |
| GO | B_9_3 | GO:1904872 | regulation of telomerase RNA localization to Cajal body | 2/66 | 12/18986 | 0.00076806158804459 | 0.0179805187149928 | 0.0145527458787397 | CCT5/CCT7 | 2 |
| GO | B_9_3 | GO:0016840 | carbon-nitrogen lyase activity | 2/66 | 12/18737 | 0.00078837610883796 | 0.0149074755125725 | 0.0125234865135983 | ADSL/GGCT | 2 |
| reactome | B_9_3 | R-HSA-162599 | Late Phase of HIV Life Cycle | 5/60 | 136/11146 | 0.00080111465151289 | 0.0058467314917432 | 0.00383173951508474 | POLR2F/POLR2H/POLR2I/POLR2J/TAF9 | 5 |
| GO | B_9_3 | GO:1904813 | ficolin-1-rich granule lumen | 4/67 | 124/19960 | 0.00080389459508193 | 0.00627803398063991 | 0.00382806950039019 | ALDOA/ILF2/PDAP1/PKM | 4 |