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Selected Module: B_9_3
Module Info
| Module_Name | B_9_3 |
| Cell_Type | B |
| Name | B_9_3: mitochondrial protein-containing complex |
| Meta_Module | B_3 |
| Gene_Number | 67 |
Genes:
ADSL, ALDOA, ATP1B3, CCND2, CCT5, CCT7, CDK4, CHCHD7, COA6, EBNA1BP2, EEF1E1, EIF3I, EIF5A, ENY2, FABP5, GADD45GIP1, GGCT, GNL2, GRWD1, HADH, HIGD1A, HSPD1, ILF2, IMP4, LDHA, LSM5, MAGOHB, MICOS10, MRPL12, MRPL16, MRPL17, MRPL18, MRPL4, MRPS25, NDUFAF8, NEDD8, NOL7, OXCT1, PAFAH1B3, PAICS, PDAP1, PDCL3, PGK1, PHB1, PKM, POLR2F, POLR2H, POLR2I, POLR2J, PPM1G, PRMT1, PSMA7, PSMF1, RBIS, RPA3, TAF9, TIMM10, TIMM13, TIMMDC1, TIPRL, TOMM22, TOMM40, TRAP1, UBA1, UQCRFS1, VBP1, VDAC2
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGACCTTG | 0.00077214560723105 | ALDOA/HIGD1A/HSPD1/TOMM40/TRAP1/UBA1/VDAC2 |
| EPC1 | 0.00077214560723105 | COA6/EIF5A/MRPL4/PDAP1/PKM/POLR2J/PRMT1/TIMM13 |
| USF | 0.00077214560723105 | EEF1E1/EIF5A/PAICS/POLR2H/PRMT1/TIMM10/UBA1 |
| ATF5 | 0.00162546136866258 | ALDOA/CCT5/HSPD1/ILF2/LSM5/MRPL18/RBIS/RPA3 |
| HIF1 | 0.00190031811966115 | ATP1B3/CCND2/LDHA/PGK1/PRMT1/UBA1 |
| HSF2 | 0.00209156428902918 | CCT5/CCT7/HSPD1/MRPL18/PGK1/PHB1 |
| MYBL1 | 0.00949528706847933 | ALDOA/CCND2/CDK4/IMP4/PKM/RPA3/TOMM40 |
| CASP8AP2 | 0.00949528706847933 | COA6/HSPD1/ILF2/LSM5/MRPL16/PSMF1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_9_3 | GO:0000315 | organellar large ribosomal subunit | 6/67 | 56/19960 | 3.2382535883904e-08 | 1.06214717699205e-06 | 6.47650717678079e-07 | GADD45GIP1/MRPL12/MRPL16/MRPL17/MRPL18/MRPL4 | 6 |
| GO | B_9_3 | GO:0005762 | mitochondrial large ribosomal subunit | 6/67 | 56/19960 | 3.2382535883904e-08 | 1.06214717699205e-06 | 6.47650717678079e-07 | GADD45GIP1/MRPL12/MRPL16/MRPL17/MRPL18/MRPL4 | 6 |
| MeSH_gene2pubmed | B_9_3 | D016679 | Genome, Viral | 10/67 | 368/26076 | 3.36752685637739e-08 | 1.0578845081677e-05 | 8.85684882978053e-06 | CDK4/EBNA1BP2/ILF2/PKM/POLR2F/POLR2H/POLR2I/POLR2J/PSMA7/PSMF1 | 10 |
| reactome | B_9_3 | R-HSA-1268020 | Mitochondrial protein import | 7/60 | 65/11146 | 4.98699165755126e-08 | 2.07458852954133e-05 | 1.35961140979556e-05 | CHCHD7/COA6/HSPD1/TIMM10/TIMM13/TOMM22/TOMM40 | 7 |
| MeSH_gene2pubmed | B_9_3 | D001084 | Vidarabine Phosphate | 5/67 | 45/26076 | 1.08531345234814e-07 | 2.84053414455321e-05 | 2.3781595552158e-05 | POLR2F/POLR2H/POLR2I/POLR2J/TAF9 | 5 |
| MeSH_gene2pubmed | B_9_3 | D017381 | Spliceosomes | 10/67 | 422/26076 | 1.20748923081796e-07 | 2.84053414455321e-05 | 2.3781595552158e-05 | HSPD1/ILF2/LSM5/POLR2F/POLR2H/POLR2I/POLR2J/PPM1G/TOMM40/TRAP1 | 10 |
| MeSH_gene2pubmed | B_9_3 | D019473 | Transcription Factors, TFII | 9/67 | 320/26076 | 1.291739037996e-07 | 2.84053414455321e-05 | 2.3781595552158e-05 | CCND2/CDK4/EIF3I/HSPD1/POLR2F/POLR2H/POLR2I/POLR2J/TAF9 | 9 |
| MeSH_gene2pubmed | B_9_3 | D034702 | RNA-Binding Protein FUS | 6/67 | 94/26076 | 1.5606004892056e-07 | 3.11978225069374e-05 | 2.61195239772305e-05 | CDK4/POLR2F/POLR2H/POLR2I/POLR2J/TAF9 | 6 |
| MeSH_gene2pubmed | B_9_3 | D013824 | D013824 | 4/67 | 20/26076 | 1.86939563680531e-07 | 3.42566750444573e-05 | 2.86804646383551e-05 | POLR2F/POLR2H/POLR2I/POLR2J | 4 |
| WikiPathways | B_9_3 | WP4629 | Aerobic glycolysis | 4/41 | 12/8836 | 1.92268247183338e-07 | 1.84065602357741e-05 | 1.45679147097539e-05 | ALDOA/LDHA/PGK1/PKM | 4 |