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Selected Module: B_9_3
Module Info
| Module_Name | B_9_3 |
| Cell_Type | B |
| Name | B_9_3: mitochondrial protein-containing complex |
| Meta_Module | B_3 |
| Gene_Number | 67 |
Genes:
ADSL, ALDOA, ATP1B3, CCND2, CCT5, CCT7, CDK4, CHCHD7, COA6, EBNA1BP2, EEF1E1, EIF3I, EIF5A, ENY2, FABP5, GADD45GIP1, GGCT, GNL2, GRWD1, HADH, HIGD1A, HSPD1, ILF2, IMP4, LDHA, LSM5, MAGOHB, MICOS10, MRPL12, MRPL16, MRPL17, MRPL18, MRPL4, MRPS25, NDUFAF8, NEDD8, NOL7, OXCT1, PAFAH1B3, PAICS, PDAP1, PDCL3, PGK1, PHB1, PKM, POLR2F, POLR2H, POLR2I, POLR2J, PPM1G, PRMT1, PSMA7, PSMF1, RBIS, RPA3, TAF9, TIMM10, TIMM13, TIMMDC1, TIPRL, TOMM22, TOMM40, TRAP1, UBA1, UQCRFS1, VBP1, VDAC2
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGACCTTG | 0.00077214560723105 | ALDOA/HIGD1A/HSPD1/TOMM40/TRAP1/UBA1/VDAC2 |
| EPC1 | 0.00077214560723105 | COA6/EIF5A/MRPL4/PDAP1/PKM/POLR2J/PRMT1/TIMM13 |
| USF | 0.00077214560723105 | EEF1E1/EIF5A/PAICS/POLR2H/PRMT1/TIMM10/UBA1 |
| ATF5 | 0.00162546136866258 | ALDOA/CCT5/HSPD1/ILF2/LSM5/MRPL18/RBIS/RPA3 |
| HIF1 | 0.00190031811966115 | ATP1B3/CCND2/LDHA/PGK1/PRMT1/UBA1 |
| HSF2 | 0.00209156428902918 | CCT5/CCT7/HSPD1/MRPL18/PGK1/PHB1 |
| MYBL1 | 0.00949528706847933 | ALDOA/CCND2/CDK4/IMP4/PKM/RPA3/TOMM40 |
| CASP8AP2 | 0.00949528706847933 | COA6/HSPD1/ILF2/LSM5/MRPL16/PSMF1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_9_3 | D009711 | Nucleotides | 7/67 | 489/26076 | 0.00025732925988898 | 0.00675791504442742 | 0.00565787961643022 | ADSL/PGK1/POLR2F/POLR2H/POLR2I/POLR2J/TAF9 | 7 |
| MeSH_gene2pubmed | B_9_3 | D009282 | D009282 | 3/67 | 48/26076 | 0.00025814682297949 | 0.00675791504442742 | 0.00565787961643022 | EIF5A/HSPD1/PRMT1 | 3 |
| reactome | B_9_3 | R-HSA-112382 | Formation of RNA Pol II elongation complex | 4/60 | 58/11146 | 0.00025909759291975 | 0.0023431434490134 | 0.00153561273606901 | POLR2F/POLR2H/POLR2I/POLR2J | 4 |
| reactome | B_9_3 | R-HSA-75955 | RNA Polymerase II Transcription Elongation | 4/60 | 58/11146 | 0.00025909759291975 | 0.0023431434490134 | 0.00153561273606901 | POLR2F/POLR2H/POLR2I/POLR2J | 4 |
| MeSH_gene2pubmed | B_9_3 | D011809 | D011809 | 6/67 | 347/26076 | 0.00026807086657989 | 0.006935151007167 | 0.00580626558078317 | CCT5/CDK4/POLR2F/POLR2H/POLR2I/POLR2J | 6 |
| KEGG | B_9_3 | hsa00010 | Glycolysis / Gluconeogenesis | 4/41 | 67/8541 | 0.00028156711550544 | 0.0113565403253862 | 0.0102747298289705 | ALDOA/LDHA/PGK1/PKM | 4 |
| reactome | B_9_3 | R-HSA-5696398 | Nucleotide Excision Repair | 5/60 | 109/11146 | 0.00029045641600333 | 0.00257084827781671 | 0.00168484236830599 | POLR2F/POLR2H/POLR2I/POLR2J/RPA3 | 5 |
| GO | B_9_3 | GO:0022613 | ribonucleoprotein complex biogenesis | 8/66 | 492/18986 | 0.00029515639032064 | 0.0158516343742792 | 0.0128297081117704 | EBNA1BP2/EIF3I/GNL2/GRWD1/IMP4/NOL7/RBIS/TAF9 | 8 |
| MeSH_gene2pubmed | B_9_3 | D004004 | Dichlororibofuranosylbenzimidazole | 4/67 | 126/26076 | 0.00031480046029041 | 0.00804937456021655 | 0.00673911878883643 | POLR2F/POLR2H/POLR2I/POLR2J | 4 |
| reactome | B_9_3 | R-HSA-157579 | Telomere Maintenance | 5/60 | 112/11146 | 0.00032945189435953 | 0.00284623934510977 | 0.00186532386230625 | POLR2F/POLR2H/POLR2I/POLR2J/RPA3 | 5 |