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Selected Module: B_9_3


Module Info

Module_Name B_9_3
Cell_Type B
Name B_9_3: mitochondrial protein-containing complex
Meta_Module B_3
Gene_Number 67

Genes:

ADSL, ALDOA, ATP1B3, CCND2, CCT5, CCT7, CDK4, CHCHD7, COA6, EBNA1BP2, EEF1E1, EIF3I, EIF5A, ENY2, FABP5, GADD45GIP1, GGCT, GNL2, GRWD1, HADH, HIGD1A, HSPD1, ILF2, IMP4, LDHA, LSM5, MAGOHB, MICOS10, MRPL12, MRPL16, MRPL17, MRPL18, MRPL4, MRPS25, NDUFAF8, NEDD8, NOL7, OXCT1, PAFAH1B3, PAICS, PDAP1, PDCL3, PGK1, PHB1, PKM, POLR2F, POLR2H, POLR2I, POLR2J, PPM1G, PRMT1, PSMA7, PSMF1, RBIS, RPA3, TAF9, TIMM10, TIMM13, TIMMDC1, TIPRL, TOMM22, TOMM40, TRAP1, UBA1, UQCRFS1, VBP1, VDAC2


UMAP Visualizations


UMAP for B_9_3

UMAP for B_9_3


Word Cloud

Enriched TF

Wordcloud for B_9_3
TF p.adjust Genes
TGACCTTG 0.00077214560723105 ALDOA/HIGD1A/HSPD1/TOMM40/TRAP1/UBA1/VDAC2
EPC1 0.00077214560723105 COA6/EIF5A/MRPL4/PDAP1/PKM/POLR2J/PRMT1/TIMM13
USF 0.00077214560723105 EEF1E1/EIF5A/PAICS/POLR2H/PRMT1/TIMM10/UBA1
ATF5 0.00162546136866258 ALDOA/CCT5/HSPD1/ILF2/LSM5/MRPL18/RBIS/RPA3
HIF1 0.00190031811966115 ATP1B3/CCND2/LDHA/PGK1/PRMT1/UBA1
HSF2 0.00209156428902918 CCT5/CCT7/HSPD1/MRPL18/PGK1/PHB1
MYBL1 0.00949528706847933 ALDOA/CCND2/CDK4/IMP4/PKM/RPA3/TOMM40
CASP8AP2 0.00949528706847933 COA6/HSPD1/ILF2/LSM5/MRPL16/PSMF1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_9_3 D010442 Peptide Chain Initiation, Translational 6/67 304/26076 0.00013127380787735 0.00424183596267271 0.0035513611922714 CDK4/EIF5A/POLR2F/POLR2H/POLR2I/POLR2J 6
MeSH_gene2pubmed B_9_3 D015368 Human T-lymphotropic virus 1 7/67 439/26076 0.00013309990060228 0.00424183596267271 0.0035513611922714 CCND2/CDK4/EIF5A/POLR2F/POLR2H/POLR2I/POLR2J 7
MeSH_gene2pubmed B_9_3 D035181 TATA-Box Binding Protein 6/67 306/26076 0.00013604079440853 0.00427362438434811 0.00357797517925604 CDK4/POLR2F/POLR2H/POLR2I/POLR2J/TAF9 6
MeSH_gene2pubmed B_9_3 D019313 BRCA1 Protein 7/67 445/26076 0.00014470356551316 0.00448173437413293 0.00375220957868816 CDK4/PHB1/POLR2F/POLR2H/POLR2I/POLR2J/UBA1 7
reactome B_9_3 R-HSA-72165 mRNA Splicing - Minor Pathway 4/60 50/11146 0.00014522607786571 0.00147351337541802 0.00096568816860644 POLR2F/POLR2H/POLR2I/POLR2J 4
MeSH_gene2pubmed B_9_3 D020365 RNA Helicases 7/67 447/26076 0.00014874915700232 0.00454304717011272 0.00380354204089282 CDK4/EIF5A/HSPD1/ILF2/PRMT1/TRAP1/UBA1 7
GO B_9_3 GO:0006457 protein folding 6/66 231/18986 0.00015018310300164 0.00856982331503114 0.00693608804652316 CCT5/CCT7/HSPD1/PDCL3/TRAP1/VBP1 6
MeSH_gene2pubmed B_9_3 D003067 Coenzymes 5/67 198/26076 0.00015819596877591 0.00476538267586637 0.00398968636465871 POLR2F/POLR2H/POLR2I/POLR2J/PRMT1 5
MeSH_gene2pubmed B_9_3 D016053 RNA, Protozoan 3/67 41/26076 0.00016116051618906 0.00478908074459137 0.00400952692481765 CCND2/CDK4/EIF5A 3
reactome B_9_3 R-HSA-6781823 Formation of TC-NER Pre-Incision Complex 4/60 52/11146 0.00016935403248581 0.00167741136938333 0.00109931564946934 POLR2F/POLR2H/POLR2I/POLR2J 4