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Selected Module: B_9_3
Module Info
| Module_Name | B_9_3 |
| Cell_Type | B |
| Name | B_9_3: mitochondrial protein-containing complex |
| Meta_Module | B_3 |
| Gene_Number | 67 |
Genes:
ADSL, ALDOA, ATP1B3, CCND2, CCT5, CCT7, CDK4, CHCHD7, COA6, EBNA1BP2, EEF1E1, EIF3I, EIF5A, ENY2, FABP5, GADD45GIP1, GGCT, GNL2, GRWD1, HADH, HIGD1A, HSPD1, ILF2, IMP4, LDHA, LSM5, MAGOHB, MICOS10, MRPL12, MRPL16, MRPL17, MRPL18, MRPL4, MRPS25, NDUFAF8, NEDD8, NOL7, OXCT1, PAFAH1B3, PAICS, PDAP1, PDCL3, PGK1, PHB1, PKM, POLR2F, POLR2H, POLR2I, POLR2J, PPM1G, PRMT1, PSMA7, PSMF1, RBIS, RPA3, TAF9, TIMM10, TIMM13, TIMMDC1, TIPRL, TOMM22, TOMM40, TRAP1, UBA1, UQCRFS1, VBP1, VDAC2
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGACCTTG | 0.00077214560723105 | ALDOA/HIGD1A/HSPD1/TOMM40/TRAP1/UBA1/VDAC2 |
| EPC1 | 0.00077214560723105 | COA6/EIF5A/MRPL4/PDAP1/PKM/POLR2J/PRMT1/TIMM13 |
| USF | 0.00077214560723105 | EEF1E1/EIF5A/PAICS/POLR2H/PRMT1/TIMM10/UBA1 |
| ATF5 | 0.00162546136866258 | ALDOA/CCT5/HSPD1/ILF2/LSM5/MRPL18/RBIS/RPA3 |
| HIF1 | 0.00190031811966115 | ATP1B3/CCND2/LDHA/PGK1/PRMT1/UBA1 |
| HSF2 | 0.00209156428902918 | CCT5/CCT7/HSPD1/MRPL18/PGK1/PHB1 |
| MYBL1 | 0.00949528706847933 | ALDOA/CCND2/CDK4/IMP4/PKM/RPA3/TOMM40 |
| CASP8AP2 | 0.00949528706847933 | COA6/HSPD1/ILF2/LSM5/MRPL16/PSMF1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| WikiPathways | B_9_3 | WP5355 | Metabolic epileptic disorders | 5/41 | 92/8836 | 6.11383296060095e-05 | 0.00101642472969991 | 0.00080445170534223 | ALDOA/HADH/LDHA/PGK1/PKM | 5 |
| MeSH_gene2pubmed | B_9_3 | D000952 | Antigens, Polyomavirus Transforming | 7/67 | 393/26076 | 6.69068036126291e-05 | 0.00241193542859298 | 0.0020193269977306 | CCND2/CDK4/PHB1/POLR2F/POLR2H/POLR2I/POLR2J | 7 |
| GO | B_9_3 | GO:0051082 | unfolded protein binding | 5/66 | 122/18737 | 7.01248055524617e-05 | 0.001823244944364 | 0.00153167338443535 | CCT5/CCT7/HSPD1/TRAP1/VBP1 | 5 |
| reactome | B_9_3 | R-HSA-674695 | RNA Polymerase II Pre-transcription Events | 5/60 | 81/11146 | 7.14588819503736e-05 | 0.00085374389789824 | 0.00055951333389586 | POLR2F/POLR2H/POLR2I/POLR2J/TAF9 | 5 |
| GO | B_9_3 | GO:0072655 | establishment of protein localization to mitochondrion | 5/66 | 125/18986 | 7.39869206976674e-05 | 0.0051961583536131 | 0.00420557233439373 | HSPD1/TIMM10/TIMM13/TOMM22/TOMM40 | 5 |
| MeSH_gene2pubmed | B_9_3 | D016356 | Gene Products, tax | 6/67 | 275/26076 | 7.5831035140049e-05 | 0.00268955558504787 | 0.00225175688387005 | CCND2/CDK4/POLR2F/POLR2H/POLR2I/POLR2J | 6 |
| MeSH_gene2pubmed | B_9_3 | D042863 | Cyclin-Dependent Kinase 9 | 5/67 | 171/26076 | 7.95205203975883e-05 | 0.00277564483102058 | 0.00232383275146837 | CDK4/POLR2F/POLR2H/POLR2I/POLR2J | 5 |
| reactome | B_9_3 | R-HSA-167169 | HIV Transcription Elongation | 4/60 | 43/11146 | 8.00384904279607e-05 | 0.00085374389789824 | 0.00055951333389586 | POLR2F/POLR2H/POLR2I/POLR2J | 4 |
| reactome | B_9_3 | R-HSA-167200 | Formation of HIV-1 elongation complex containing HIV-1 Tat | 4/60 | 43/11146 | 8.00384904279607e-05 | 0.00085374389789824 | 0.00055951333389586 | POLR2F/POLR2H/POLR2I/POLR2J | 4 |
| reactome | B_9_3 | R-HSA-167246 | Tat-mediated elongation of the HIV-1 transcript | 4/60 | 43/11146 | 8.00384904279607e-05 | 0.00085374389789824 | 0.00055951333389586 | POLR2F/POLR2H/POLR2I/POLR2J | 4 |