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Selected Module: B_9_3
Module Info
| Module_Name | B_9_3 |
| Cell_Type | B |
| Name | B_9_3: mitochondrial protein-containing complex |
| Meta_Module | B_3 |
| Gene_Number | 67 |
Genes:
ADSL, ALDOA, ATP1B3, CCND2, CCT5, CCT7, CDK4, CHCHD7, COA6, EBNA1BP2, EEF1E1, EIF3I, EIF5A, ENY2, FABP5, GADD45GIP1, GGCT, GNL2, GRWD1, HADH, HIGD1A, HSPD1, ILF2, IMP4, LDHA, LSM5, MAGOHB, MICOS10, MRPL12, MRPL16, MRPL17, MRPL18, MRPL4, MRPS25, NDUFAF8, NEDD8, NOL7, OXCT1, PAFAH1B3, PAICS, PDAP1, PDCL3, PGK1, PHB1, PKM, POLR2F, POLR2H, POLR2I, POLR2J, PPM1G, PRMT1, PSMA7, PSMF1, RBIS, RPA3, TAF9, TIMM10, TIMM13, TIMMDC1, TIPRL, TOMM22, TOMM40, TRAP1, UBA1, UQCRFS1, VBP1, VDAC2
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGACCTTG | 0.00077214560723105 | ALDOA/HIGD1A/HSPD1/TOMM40/TRAP1/UBA1/VDAC2 |
| EPC1 | 0.00077214560723105 | COA6/EIF5A/MRPL4/PDAP1/PKM/POLR2J/PRMT1/TIMM13 |
| USF | 0.00077214560723105 | EEF1E1/EIF5A/PAICS/POLR2H/PRMT1/TIMM10/UBA1 |
| ATF5 | 0.00162546136866258 | ALDOA/CCT5/HSPD1/ILF2/LSM5/MRPL18/RBIS/RPA3 |
| HIF1 | 0.00190031811966115 | ATP1B3/CCND2/LDHA/PGK1/PRMT1/UBA1 |
| HSF2 | 0.00209156428902918 | CCT5/CCT7/HSPD1/MRPL18/PGK1/PHB1 |
| MYBL1 | 0.00949528706847933 | ALDOA/CCND2/CDK4/IMP4/PKM/RPA3/TOMM40 |
| CASP8AP2 | 0.00949528706847933 | COA6/HSPD1/ILF2/LSM5/MRPL16/PSMF1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_9_3 | GO:0035036 | sperm-egg recognition | 4/66 | 51/18986 | 2.94322360888679e-05 | 0.00268716315491364 | 0.00217488734046161 | ALDOA/CCT5/CCT7/VDAC2 | 4 |
| MeSH_gene2pubmed | B_9_3 | D051747 | DNA-Activated Protein Kinase | 6/67 | 234/26076 | 3.09445386884876e-05 | 0.00128390642596197 | 0.0010749155544422 | CDK4/ILF2/POLR2F/POLR2H/POLR2I/POLR2J | 6 |
| MeSH_gene2pubmed | B_9_3 | D002939 | Ciprofloxacin | 5/67 | 141/26076 | 3.17560959040687e-05 | 0.00129317879431569 | 0.00108267859134924 | ALDOA/HSPD1/PGK1/PHB1/VDAC2 | 5 |
| GO | B_9_3 | GO:0006626 | protein targeting to mitochondrion | 5/66 | 106/18986 | 3.36343225448092e-05 | 0.00279164877121917 | 0.00225945401210106 | HSPD1/TIMM10/TIMM13/TOMM22/TOMM40 | 5 |
| MeSH_gene2pubmed | B_9_3 | D020035 | Holoenzymes | 5/67 | 143/26076 | 3.39730778945462e-05 | 0.00135830542345649 | 0.00113720408110165 | GADD45GIP1/POLR2F/POLR2H/POLR2I/POLR2J | 5 |
| GO | B_9_3 | GO:0003735 | structural constituent of ribosome | 6/66 | 175/18737 | 3.47972399198099e-05 | 0.00103397512904578 | 0.00086862283108097 | MRPL12/MRPL16/MRPL17/MRPL18/MRPL4/MRPS25 | 6 |
| MeSH_gene2pubmed | B_9_3 | D035581 | Transcription Factor TFIIB | 5/67 | 144/26076 | 3.51256325610121e-05 | 0.00137930832145832 | 0.00115478818325583 | POLR2F/POLR2H/POLR2I/POLR2J/TAF9 | 5 |
| reactome | B_9_3 | R-HSA-167172 | Transcription of the HIV genome | 5/60 | 70/11146 | 3.53162017566233e-05 | 0.00047392064292759 | 0.00031059070475264 | POLR2F/POLR2H/POLR2I/POLR2J/TAF9 | 5 |
| WikiPathways | B_9_3 | WP4290 | Metabolic reprogramming in colon cancer | 4/41 | 42/8836 | 3.93148928020378e-05 | 0.00101642472969991 | 0.00080445170534223 | LDHA/PAICS/PGK1/PKM | 4 |
| MeSH_gene2pubmed | B_9_3 | D001105 | Archaea | 4/67 | 74/26076 | 3.99998950647498e-05 | 0.00154315384644535 | 0.00129196336968139 | EIF5A/NEDD8/POLR2H/VBP1 | 4 |