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Selected Module: B_9_3
Module Info
| Module_Name | B_9_3 |
| Cell_Type | B |
| Name | B_9_3: mitochondrial protein-containing complex |
| Meta_Module | B_3 |
| Gene_Number | 67 |
Genes:
ADSL, ALDOA, ATP1B3, CCND2, CCT5, CCT7, CDK4, CHCHD7, COA6, EBNA1BP2, EEF1E1, EIF3I, EIF5A, ENY2, FABP5, GADD45GIP1, GGCT, GNL2, GRWD1, HADH, HIGD1A, HSPD1, ILF2, IMP4, LDHA, LSM5, MAGOHB, MICOS10, MRPL12, MRPL16, MRPL17, MRPL18, MRPL4, MRPS25, NDUFAF8, NEDD8, NOL7, OXCT1, PAFAH1B3, PAICS, PDAP1, PDCL3, PGK1, PHB1, PKM, POLR2F, POLR2H, POLR2I, POLR2J, PPM1G, PRMT1, PSMA7, PSMF1, RBIS, RPA3, TAF9, TIMM10, TIMM13, TIMMDC1, TIPRL, TOMM22, TOMM40, TRAP1, UBA1, UQCRFS1, VBP1, VDAC2
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGACCTTG | 0.00077214560723105 | ALDOA/HIGD1A/HSPD1/TOMM40/TRAP1/UBA1/VDAC2 |
| EPC1 | 0.00077214560723105 | COA6/EIF5A/MRPL4/PDAP1/PKM/POLR2J/PRMT1/TIMM13 |
| USF | 0.00077214560723105 | EEF1E1/EIF5A/PAICS/POLR2H/PRMT1/TIMM10/UBA1 |
| ATF5 | 0.00162546136866258 | ALDOA/CCT5/HSPD1/ILF2/LSM5/MRPL18/RBIS/RPA3 |
| HIF1 | 0.00190031811966115 | ATP1B3/CCND2/LDHA/PGK1/PRMT1/UBA1 |
| HSF2 | 0.00209156428902918 | CCT5/CCT7/HSPD1/MRPL18/PGK1/PHB1 |
| MYBL1 | 0.00949528706847933 | ALDOA/CCND2/CDK4/IMP4/PKM/RPA3/TOMM40 |
| CASP8AP2 | 0.00949528706847933 | COA6/HSPD1/ILF2/LSM5/MRPL16/PSMF1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_9_3 | R-HSA-72766 | Translation | 9/60 | 292/11146 | 2.35105090160976e-05 | 0.00038308646456812 | 0.00025106122045329 | EEF1E1/EIF3I/GADD45GIP1/MRPL12/MRPL16/MRPL17/MRPL18/MRPL4/MRPS25 | 9 |
| reactome | B_9_3 | R-HSA-9609507 | Protein localization | 7/60 | 164/11146 | 2.63430655624891e-05 | 0.00038308646456812 | 0.00025106122045329 | CHCHD7/COA6/HSPD1/TIMM10/TIMM13/TOMM22/TOMM40 | 7 |
| MeSH_gene2pubmed | B_9_3 | D015694 | Gene Products, rev | 5/67 | 136/26076 | 2.67030776736831e-05 | 0.00117440135608858 | 0.00098323542844782 | EIF5A/POLR2F/POLR2H/POLR2I/POLR2J | 5 |
| reactome | B_9_3 | R-HSA-113418 | Formation of the Early Elongation Complex | 4/60 | 33/11146 | 2.7626427733278e-05 | 0.00038308646456812 | 0.00025106122045329 | POLR2F/POLR2H/POLR2I/POLR2J | 4 |
| reactome | B_9_3 | R-HSA-167158 | Formation of the HIV-1 Early Elongation Complex | 4/60 | 33/11146 | 2.7626427733278e-05 | 0.00038308646456812 | 0.00025106122045329 | POLR2F/POLR2H/POLR2I/POLR2J | 4 |
| reactome | B_9_3 | R-HSA-167287 | HIV elongation arrest and recovery | 4/60 | 33/11146 | 2.7626427733278e-05 | 0.00038308646456812 | 0.00025106122045329 | POLR2F/POLR2H/POLR2I/POLR2J | 4 |
| reactome | B_9_3 | R-HSA-167290 | Pausing and recovery of HIV elongation | 4/60 | 33/11146 | 2.7626427733278e-05 | 0.00038308646456812 | 0.00025106122045329 | POLR2F/POLR2H/POLR2I/POLR2J | 4 |
| reactome | B_9_3 | R-HSA-1839126 | FGFR2 mutant receptor activation | 4/60 | 33/11146 | 2.7626427733278e-05 | 0.00038308646456812 | 0.00025106122045329 | POLR2F/POLR2H/POLR2I/POLR2J | 4 |
| MeSH_gene2pubmed | B_9_3 | D012265 | Ribonucleotides | 5/67 | 138/26076 | 2.86429813637382e-05 | 0.00121147427582739 | 0.00101427371696326 | ADSL/POLR2F/POLR2H/POLR2I/POLR2J | 5 |
| MeSH_gene2pubmed | B_9_3 | D016325 | HIV Long Terminal Repeat | 8/67 | 474/26076 | 2.86478682778645e-05 | 0.00121147427582739 | 0.00101427371696326 | POLR2F/POLR2H/POLR2I/POLR2J/PRMT1/PSMF1/TAF9/UBA1 | 8 |