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Selected Module: B_9_2
Module Info
| Module_Name | B_9_2 |
| Cell_Type | B |
| Name | B_9_2: ATP biosynthetic process |
| Meta_Module | B_3 |
| Gene_Number | 93 |
Genes:
ANKRD39, ANTKMT, ANXA2, ANXA5, APOBEC3C, ARF3, ATOX1, ATP5MG, ATP6V0B, BID, CD320, CD99, CDK2AP2, CINP, COX5A, CYCS, DAZAP1, DDRGK1, DESI1, DPM2, DYNLL1, EI24, EIF3A, EIF3J, EIF5B, EPRS1, ERP29, EXOSC4, FAM174C, FLOT1, GARS1, GCDH, GEMIN7, GFUS, GNG5, GSPT1, GYG1, H2AJ, HINT2, HMGN3, LRRC59, LSM3, MPG, MRPL24, MRPL40, MRPL52, MRPS28, MTX1, MYL6, NAA10, NDUFA1, NDUFA3, NDUFB11, NDUFB4, NDUFS2, NTAN1, NUDT2, PARP1, PEBP1, PSMC2, PSMD12, RALY, RNASEH1, RNPEP, ROMO1, RPL22L1, RPL36AL, RPS27L, RPS6KB2, RTCA, SEC11A, SERF2, SND1, SRM, TAP1, TARS1, TMED3, TMX2, TOR3A, TPM4, TSEN15, TXNL1, UCHL3, UFC1, UQCC5, VCP, VIM, YWHAG, ZDHHC12, ZNF593, ZNF706, ZNG1A, ZNRD2
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| IRX2 | 0.00722520263260075 | ANXA2/ATP6V0B/NUDT2/PSMC2/SERF2/TARS1/UCHL3 |
| CETS1P54 | 0.0343080825056725 | ARF3/GSPT1/MRPL52/PSMC2/PSMD12/UFC1 |
| AML1 | 0.0343080825056725 | ARF3/ATP6V0B/DYNLL1/EIF3J/MTX1/VIM |
| AML1 | 0.0343080825056725 | ARF3/ATP6V0B/DYNLL1/EIF3J/MTX1/VIM |
| TASOR | 0.0407822546538425 | ANTKMT/CDK2AP2/CYCS/EPRS1/MPG/TXNL1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_9_2 | D002213 | Capsid | 6/93 | 205/26076 | 9.47329221139111e-05 | 0.0248594976447255 | 0.0216223739772278 | APOBEC3C/DYNLL1/PSMC2/PSMD12/RNASEH1/SND1 | 6 |
| reactome | B_9_2 | R-HSA-109581 | Apoptosis | 7/67 | 180/11146 | 9.79500742807071e-05 | 0.00553962086765332 | 0.00459391576451036 | BID/CYCS/DYNLL1/PSMC2/PSMD12/VIM/YWHAG | 7 |
| GO | B_9_2 | GO:0006120 | mitochondrial electron transport, NADH to ubiquinone | 4/90 | 51/18986 | 9.95118904371387e-05 | 0.00301775593325648 | 0.00283310473876113 | NDUFA1/NDUFA3/NDUFB4/NDUFS2 | 4 |
| MeSH_gene2pubmed | B_9_2 | D006192 | Haemophilus Infections | 5/93 | 131/26076 | 0.00010811570702546 | 0.0261889508787062 | 0.022778710095567 | ANXA2/ANXA5/PEBP1/PSMC2/VCP | 5 |
| KEGG | B_9_2 | hsa04714 | Thermogenesis | 8/55 | 235/8541 | 0.00011617044256033 | 0.00267192017888765 | 0.0023845511893963 | ATP5MG/COX5A/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2/RPS6KB2 | 8 |
| MeSH_gene2pubmed | B_9_2 | D009379 | Neoplasms, Muscle Tissue | 3/93 | 28/26076 | 0.00013486109254936 | 0.0300562113253213 | 0.0261423883500146 | CD99/TPM4/VIM | 3 |
| KEGG | B_9_2 | hsa05016 | Huntington disease | 9/55 | 311/8541 | 0.00014544361454377 | 0.00286121497807662 | 0.00255348705137273 | COX5A/CYCS/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2/PSMC2/PSMD12 | 9 |
| GO | B_9_2 | GO:0030808 | regulation of nucleotide biosynthetic process | 3/90 | 22/18986 | 0.00014860745357055 | 0.00430631376568896 | 0.00404281797666795 | ANTKMT/PARP1/VCP | 3 |
| GO | B_9_2 | GO:1900371 | regulation of purine nucleotide biosynthetic process | 3/90 | 22/18986 | 0.00014860745357055 | 0.00430631376568896 | 0.00404281797666795 | ANTKMT/PARP1/VCP | 3 |
| MeSH_gene2pubmed | B_9_2 | D006643 | Histidine-tRNA Ligase | 3/93 | 29/26076 | 0.00015003396334152 | 0.0300562113253213 | 0.0261423883500146 | EPRS1/GARS1/TARS1 | 3 |