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Selected Module: B_9_2
Module Info
| Module_Name | B_9_2 |
| Cell_Type | B |
| Name | B_9_2: ATP biosynthetic process |
| Meta_Module | B_3 |
| Gene_Number | 93 |
Genes:
ANKRD39, ANTKMT, ANXA2, ANXA5, APOBEC3C, ARF3, ATOX1, ATP5MG, ATP6V0B, BID, CD320, CD99, CDK2AP2, CINP, COX5A, CYCS, DAZAP1, DDRGK1, DESI1, DPM2, DYNLL1, EI24, EIF3A, EIF3J, EIF5B, EPRS1, ERP29, EXOSC4, FAM174C, FLOT1, GARS1, GCDH, GEMIN7, GFUS, GNG5, GSPT1, GYG1, H2AJ, HINT2, HMGN3, LRRC59, LSM3, MPG, MRPL24, MRPL40, MRPL52, MRPS28, MTX1, MYL6, NAA10, NDUFA1, NDUFA3, NDUFB11, NDUFB4, NDUFS2, NTAN1, NUDT2, PARP1, PEBP1, PSMC2, PSMD12, RALY, RNASEH1, RNPEP, ROMO1, RPL22L1, RPL36AL, RPS27L, RPS6KB2, RTCA, SEC11A, SERF2, SND1, SRM, TAP1, TARS1, TMED3, TMX2, TOR3A, TPM4, TSEN15, TXNL1, UCHL3, UFC1, UQCC5, VCP, VIM, YWHAG, ZDHHC12, ZNF593, ZNF706, ZNG1A, ZNRD2
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| IRX2 | 0.00722520263260075 | ANXA2/ATP6V0B/NUDT2/PSMC2/SERF2/TARS1/UCHL3 |
| CETS1P54 | 0.0343080825056725 | ARF3/GSPT1/MRPL52/PSMC2/PSMD12/UFC1 |
| AML1 | 0.0343080825056725 | ARF3/ATP6V0B/DYNLL1/EIF3J/MTX1/VIM |
| AML1 | 0.0343080825056725 | ARF3/ATP6V0B/DYNLL1/EIF3J/MTX1/VIM |
| TASOR | 0.0407822546538425 | ANTKMT/CDK2AP2/CYCS/EPRS1/MPG/TXNL1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_9_2 | R-HSA-72706 | GTP hydrolysis and joining of the 60S ribosomal subunit | 6/67 | 113/11146 | 5.7346044174311e-05 | 0.00486485608078738 | 0.0040343445112103 | EIF3A/EIF3J/EIF5B/RPL22L1/RPL36AL/RPS27L | 6 |
| KEGG | B_9_2 | hsa05020 | Prion disease | 9/55 | 278/8541 | 6.15006385333453e-05 | 0.00169741762352033 | 0.00151485783334766 | COX5A/CYCS/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2/PSMC2/PSMD12 | 9 |
| MeSH_gene2pubmed | B_9_2 | D004697 | Endocarditis, Bacterial | 5/93 | 118/26076 | 6.59182109107274e-05 | 0.0220155575408249 | 0.019148762588366 | ANXA2/ANXA5/PEBP1/PSMC2/VCP | 5 |
| GO | B_9_2 | GO:2001169 | regulation of ATP biosynthetic process | 3/90 | 17/18986 | 6.67548620162931e-05 | 0.00207257952545824 | 0.00194576201816915 | ANTKMT/PARP1/VCP | 3 |
| GO | B_9_2 | GO:1990204 | oxidoreductase complex | 6/92 | 150/19960 | 6.826883999407e-05 | 0.00326325055171655 | 0.00265889166292694 | COX5A/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2 | 6 |
| MeSH_gene2pubmed | B_9_2 | D019065 | Virus Assembly | 6/93 | 194/26076 | 6.99128534164016e-05 | 0.0220155575408249 | 0.019148762588366 | ANXA2/APOBEC3C/PSMC2/PSMD12/VIM/YWHAG | 6 |
| reactome | B_9_2 | R-HSA-72613 | Eukaryotic Translation Initiation | 6/67 | 120/11146 | 8.0229170637511e-05 | 0.00510458098181163 | 0.00423314439811078 | EIF3A/EIF3J/EIF5B/RPL22L1/RPL36AL/RPS27L | 6 |
| reactome | B_9_2 | R-HSA-72737 | Cap-dependent Translation Initiation | 6/67 | 120/11146 | 8.0229170637511e-05 | 0.00510458098181163 | 0.00423314439811078 | EIF3A/EIF3J/EIF5B/RPL22L1/RPL36AL/RPS27L | 6 |
| MeSH_gene2pubmed | B_9_2 | D016333 | HIV Protease | 5/93 | 123/26076 | 8.02739741614597e-05 | 0.0229802495122215 | 0.0199878354802027 | BID/CYCS/PARP1/PEBP1/VIM | 5 |
| GO | B_9_2 | GO:1905369 | endopeptidase complex | 5/92 | 98/19960 | 9.03076864244046e-05 | 0.00359725617590545 | 0.00293103894535348 | PSMC2/PSMD12/SEC11A/TXNL1/VCP | 5 |