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Selected Module: B_9_2
Module Info
| Module_Name | B_9_2 |
| Cell_Type | B |
| Name | B_9_2: ATP biosynthetic process |
| Meta_Module | B_3 |
| Gene_Number | 93 |
Genes:
ANKRD39, ANTKMT, ANXA2, ANXA5, APOBEC3C, ARF3, ATOX1, ATP5MG, ATP6V0B, BID, CD320, CD99, CDK2AP2, CINP, COX5A, CYCS, DAZAP1, DDRGK1, DESI1, DPM2, DYNLL1, EI24, EIF3A, EIF3J, EIF5B, EPRS1, ERP29, EXOSC4, FAM174C, FLOT1, GARS1, GCDH, GEMIN7, GFUS, GNG5, GSPT1, GYG1, H2AJ, HINT2, HMGN3, LRRC59, LSM3, MPG, MRPL24, MRPL40, MRPL52, MRPS28, MTX1, MYL6, NAA10, NDUFA1, NDUFA3, NDUFB11, NDUFB4, NDUFS2, NTAN1, NUDT2, PARP1, PEBP1, PSMC2, PSMD12, RALY, RNASEH1, RNPEP, ROMO1, RPL22L1, RPL36AL, RPS27L, RPS6KB2, RTCA, SEC11A, SERF2, SND1, SRM, TAP1, TARS1, TMED3, TMX2, TOR3A, TPM4, TSEN15, TXNL1, UCHL3, UFC1, UQCC5, VCP, VIM, YWHAG, ZDHHC12, ZNF593, ZNF706, ZNG1A, ZNRD2
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| IRX2 | 0.00722520263260075 | ANXA2/ATP6V0B/NUDT2/PSMC2/SERF2/TARS1/UCHL3 |
| CETS1P54 | 0.0343080825056725 | ARF3/GSPT1/MRPL52/PSMC2/PSMD12/UFC1 |
| AML1 | 0.0343080825056725 | ARF3/ATP6V0B/DYNLL1/EIF3J/MTX1/VIM |
| AML1 | 0.0343080825056725 | ARF3/ATP6V0B/DYNLL1/EIF3J/MTX1/VIM |
| TASOR | 0.0407822546538425 | ANTKMT/CDK2AP2/CYCS/EPRS1/MPG/TXNL1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_9_2 | GO:0030964 | NADH dehydrogenase complex | 5/92 | 45/19960 | 1.96875831871194e-06 | 0.00015684441272405 | 0.00012779659261814 | NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2 | 5 |
| GO | B_9_2 | GO:0045271 | respiratory chain complex I | 5/92 | 45/19960 | 1.96875831871194e-06 | 0.00015684441272405 | 0.00012779659261814 | NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2 | 5 |
| MeSH_gene2pubmed | B_9_2 | D042967 | Electron Transport Complex I | 7/93 | 163/26076 | 1.97759429358978e-06 | 0.00311372221525711 | 0.00270826334311611 | CYCS/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2/PARP1 | 7 |
| WikiPathways | B_9_2 | WP4396 | Nonalcoholic fatty liver disease | 8/50 | 154/8836 | 2.0486732488485e-06 | 0.00029910629433188 | 0.00026956226958532 | BID/COX5A/CYCS/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2 | 8 |
| GO | B_9_2 | GO:0022904 | respiratory electron transport chain | 7/90 | 125/18986 | 2.15112925778791e-06 | 0.00010788740585213 | 0.00010128596464807 | BID/COX5A/CYCS/NDUFA1/NDUFA3/NDUFB4/NDUFS2 | 7 |
| MeSH_gene2pubmed | B_9_2 | D009245 | NADH Dehydrogenase | 6/93 | 113/26076 | 3.24970014173336e-06 | 0.00341110191543945 | 0.00296691921711937 | NDUFA1/NDUFA3/NDUFB11/NDUFS2/PARP1/TAP1 | 6 |
| GO | B_9_2 | GO:0006091 | generation of precursor metabolites and energy | 12/90 | 490/18986 | 3.36900530265903e-06 | 0.00016271047832101 | 0.0001527545094344 | ANTKMT/ATP5MG/BID/COX5A/CYCS/GYG1/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2/VCP | 12 |
| GO | B_9_2 | GO:0022900 | electron transport chain | 7/90 | 135/18986 | 3.59426216482879e-06 | 0.00016738992367631 | 0.00015714762773292 | BID/COX5A/CYCS/NDUFA1/NDUFA3/NDUFB4/NDUFS2 | 7 |
| reactome | B_9_2 | R-HSA-611105 | Respiratory electron transport | 8/67 | 158/11146 | 4.38226782957501e-06 | 0.00111528716262684 | 0.00092488915771556 | COX5A/CYCS/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2/UQCC5 | 8 |
| GO | B_9_2 | GO:0019646 | aerobic electron transport chain | 6/90 | 93/18986 | 5.24812270442903e-06 | 0.00023598455195087 | 0.00022154507097099 | COX5A/CYCS/NDUFA1/NDUFA3/NDUFB4/NDUFS2 | 6 |