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Selected Module: B_9_2
Module Info
| Module_Name | B_9_2 |
| Cell_Type | B |
| Name | B_9_2: ATP biosynthetic process |
| Meta_Module | B_3 |
| Gene_Number | 93 |
Genes:
ANKRD39, ANTKMT, ANXA2, ANXA5, APOBEC3C, ARF3, ATOX1, ATP5MG, ATP6V0B, BID, CD320, CD99, CDK2AP2, CINP, COX5A, CYCS, DAZAP1, DDRGK1, DESI1, DPM2, DYNLL1, EI24, EIF3A, EIF3J, EIF5B, EPRS1, ERP29, EXOSC4, FAM174C, FLOT1, GARS1, GCDH, GEMIN7, GFUS, GNG5, GSPT1, GYG1, H2AJ, HINT2, HMGN3, LRRC59, LSM3, MPG, MRPL24, MRPL40, MRPL52, MRPS28, MTX1, MYL6, NAA10, NDUFA1, NDUFA3, NDUFB11, NDUFB4, NDUFS2, NTAN1, NUDT2, PARP1, PEBP1, PSMC2, PSMD12, RALY, RNASEH1, RNPEP, ROMO1, RPL22L1, RPL36AL, RPS27L, RPS6KB2, RTCA, SEC11A, SERF2, SND1, SRM, TAP1, TARS1, TMED3, TMX2, TOR3A, TPM4, TSEN15, TXNL1, UCHL3, UFC1, UQCC5, VCP, VIM, YWHAG, ZDHHC12, ZNF593, ZNF706, ZNG1A, ZNRD2
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| IRX2 | 0.00722520263260075 | ANXA2/ATP6V0B/NUDT2/PSMC2/SERF2/TARS1/UCHL3 |
| CETS1P54 | 0.0343080825056725 | ARF3/GSPT1/MRPL52/PSMC2/PSMD12/UFC1 |
| AML1 | 0.0343080825056725 | ARF3/ATP6V0B/DYNLL1/EIF3J/MTX1/VIM |
| AML1 | 0.0343080825056725 | ARF3/ATP6V0B/DYNLL1/EIF3J/MTX1/VIM |
| TASOR | 0.0407822546538425 | ANTKMT/CDK2AP2/CYCS/EPRS1/MPG/TXNL1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_9_2 | GO:0009260 | ribonucleotide biosynthetic process | 10/90 | 171/18986 | 8.29499812485986e-09 | 1.08166775548173e-06 | 1.01548240202232e-06 | ANTKMT/ATP5MG/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2/NUDT2/PARP1/VCP | 10 |
| GO | B_9_2 | GO:0046390 | ribose phosphate biosynthetic process | 10/90 | 178/18986 | 1.21904140212885e-08 | 1.44511817125093e-06 | 1.35669392409172e-06 | ANTKMT/ATP5MG/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2/NUDT2/PARP1/VCP | 10 |
| GO | B_9_2 | GO:0009165 | nucleotide biosynthetic process | 11/90 | 233/18986 | 1.33338792320469e-08 | 1.44894820988243e-06 | 1.36028960937461e-06 | ANTKMT/ATP5MG/GARS1/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2/NUDT2/PARP1/VCP | 11 |
| MeSH_gene2pubmed | B_9_2 | D009492 | Neurospora crassa | 7/93 | 81/26076 | 1.63674819660365e-08 | 5.1541200711049e-05 | 4.48296716585547e-05 | BID/GYG1/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2 | 7 |
| GO | B_9_2 | GO:0045333 | cellular respiration | 11/90 | 249/18986 | 2.64440607019657e-08 | 2.65254270425871e-06 | 2.49023826691385e-06 | ANTKMT/ATP5MG/BID/COX5A/CYCS/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2/VCP | 11 |
| GO | B_9_2 | GO:0006164 | purine nucleotide biosynthetic process | 10/90 | 197/18986 | 3.20388407417021e-08 | 2.8278997168073e-06 | 2.65486549131973e-06 | ANTKMT/ATP5MG/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2/NUDT2/PARP1/VCP | 10 |
| GO | B_9_2 | GO:0042776 | proton motive force-driven mitochondrial ATP synthesis | 7/90 | 68/18986 | 3.25295212822925e-08 | 2.8278997168073e-06 | 2.65486549131973e-06 | ANTKMT/ATP5MG/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2 | 7 |
| GO | B_9_2 | GO:0072522 | purine-containing compound biosynthetic process | 11/90 | 263/18986 | 4.62954192780354e-08 | 3.77307667115989e-06 | 3.54220872502337e-06 | ANTKMT/ATP5MG/GCDH/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2/NUDT2/PARP1/VCP | 11 |
| GO | B_9_2 | GO:0015986 | proton motive force-driven ATP synthesis | 7/90 | 77/18986 | 7.79588433948873e-08 | 5.97990186981959e-06 | 5.61400215902501e-06 | ANTKMT/ATP5MG/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2 | 7 |
| GO | B_9_2 | GO:0015980 | energy derivation by oxidation of organic compounds | 12/90 | 356/18986 | 1.15742371459508e-07 | 8.3848917990666e-06 | 7.87183497119346e-06 | ANTKMT/ATP5MG/BID/COX5A/CYCS/GYG1/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2/VCP | 12 |