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Selected Module: B_9_2


Module Info

Module_Name B_9_2
Cell_Type B
Name B_9_2: ATP biosynthetic process
Meta_Module B_3
Gene_Number 93

Genes:

ANKRD39, ANTKMT, ANXA2, ANXA5, APOBEC3C, ARF3, ATOX1, ATP5MG, ATP6V0B, BID, CD320, CD99, CDK2AP2, CINP, COX5A, CYCS, DAZAP1, DDRGK1, DESI1, DPM2, DYNLL1, EI24, EIF3A, EIF3J, EIF5B, EPRS1, ERP29, EXOSC4, FAM174C, FLOT1, GARS1, GCDH, GEMIN7, GFUS, GNG5, GSPT1, GYG1, H2AJ, HINT2, HMGN3, LRRC59, LSM3, MPG, MRPL24, MRPL40, MRPL52, MRPS28, MTX1, MYL6, NAA10, NDUFA1, NDUFA3, NDUFB11, NDUFB4, NDUFS2, NTAN1, NUDT2, PARP1, PEBP1, PSMC2, PSMD12, RALY, RNASEH1, RNPEP, ROMO1, RPL22L1, RPL36AL, RPS27L, RPS6KB2, RTCA, SEC11A, SERF2, SND1, SRM, TAP1, TARS1, TMED3, TMX2, TOR3A, TPM4, TSEN15, TXNL1, UCHL3, UFC1, UQCC5, VCP, VIM, YWHAG, ZDHHC12, ZNF593, ZNF706, ZNG1A, ZNRD2


UMAP Visualizations


UMAP for B_9_2

UMAP for B_9_2


Word Cloud

Enriched TF

Wordcloud for B_9_2
TF p.adjust Genes
IRX2 0.00722520263260075 ANXA2/ATP6V0B/NUDT2/PSMC2/SERF2/TARS1/UCHL3
CETS1P54 0.0343080825056725 ARF3/GSPT1/MRPL52/PSMC2/PSMD12/UFC1
AML1 0.0343080825056725 ARF3/ATP6V0B/DYNLL1/EIF3J/MTX1/VIM
AML1 0.0343080825056725 ARF3/ATP6V0B/DYNLL1/EIF3J/MTX1/VIM
TASOR 0.0407822546538425 ANTKMT/CDK2AP2/CYCS/EPRS1/MPG/TXNL1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
reactome B_9_2 R-HSA-72764 Eukaryotic Translation Termination 4/67 94/11146 0.00242357596670687 0.0463707684592396 0.0384545096725366 GSPT1/RPL22L1/RPL36AL/RPS27L 4
reactome B_9_2 R-HSA-445355 Smooth Muscle Contraction 3/67 45/11146 0.00245974606758245 0.0463707684592396 0.0384545096725366 ANXA2/MYL6/TPM4 3
GO B_9_2 GO:1904813 ficolin-1-rich granule lumen 4/92 124/19960 0.00260170662336235 0.0282639946810728 0.0230294605417241 GYG1/PSMC2/PSMD12/VCP 4
reactome B_9_2 R-HSA-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) 4/67 96/11146 0.0026165517549229 0.0475651729734198 0.0394450095384993 GSPT1/RPL22L1/RPL36AL/RPS27L 4
GO B_9_2 GO:0055102 lipase inhibitor activity 2/91 16/18737 0.00267822493751813 0.0403616227706383 0.0342784116831976 ANXA2/ANXA5 2
GO B_9_2 GO:0033290 eukaryotic 48S preinitiation complex 2/92 17/19960 0.002732132630736 0.0283904216846045 0.0231324730748815 EIF3A/EIF3J 2
GO B_9_2 GO:0022853 active monoatomic ion transmembrane transporter activity 6/91 287/18737 0.00275192882527079 0.0403616227706383 0.0342784116831976 ATP6V0B/COX5A/NDUFA1/NDUFA3/NDUFB4/NDUFS2 6
GO B_9_2 GO:0016282 eukaryotic 43S preinitiation complex 2/92 18/19960 0.0030644561815902 0.0305168761416691 0.0248651049822012 EIF3A/EIF3J 2
GO B_9_2 GO:0140098 catalytic activity, acting on RNA 7/91 397/18737 0.00320015122883469 0.0444652591795978 0.0377635574372182 EPRS1/EXOSC4/GARS1/RNASEH1/RTCA/SND1/TARS1 7
KEGG B_9_2 hsa05208 Chemical carcinogenesis - reactive oxygen species 6/55 227/8541 0.00322309422796151 0.0317705002470492 0.0283535356895862 COX5A/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2 6