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Selected Module: B_9_2
Module Info
| Module_Name | B_9_2 |
| Cell_Type | B |
| Name | B_9_2: ATP biosynthetic process |
| Meta_Module | B_3 |
| Gene_Number | 93 |
Genes:
ANKRD39, ANTKMT, ANXA2, ANXA5, APOBEC3C, ARF3, ATOX1, ATP5MG, ATP6V0B, BID, CD320, CD99, CDK2AP2, CINP, COX5A, CYCS, DAZAP1, DDRGK1, DESI1, DPM2, DYNLL1, EI24, EIF3A, EIF3J, EIF5B, EPRS1, ERP29, EXOSC4, FAM174C, FLOT1, GARS1, GCDH, GEMIN7, GFUS, GNG5, GSPT1, GYG1, H2AJ, HINT2, HMGN3, LRRC59, LSM3, MPG, MRPL24, MRPL40, MRPL52, MRPS28, MTX1, MYL6, NAA10, NDUFA1, NDUFA3, NDUFB11, NDUFB4, NDUFS2, NTAN1, NUDT2, PARP1, PEBP1, PSMC2, PSMD12, RALY, RNASEH1, RNPEP, ROMO1, RPL22L1, RPL36AL, RPS27L, RPS6KB2, RTCA, SEC11A, SERF2, SND1, SRM, TAP1, TARS1, TMED3, TMX2, TOR3A, TPM4, TSEN15, TXNL1, UCHL3, UFC1, UQCC5, VCP, VIM, YWHAG, ZDHHC12, ZNF593, ZNF706, ZNG1A, ZNRD2
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| IRX2 | 0.00722520263260075 | ANXA2/ATP6V0B/NUDT2/PSMC2/SERF2/TARS1/UCHL3 |
| CETS1P54 | 0.0343080825056725 | ARF3/GSPT1/MRPL52/PSMC2/PSMD12/UFC1 |
| AML1 | 0.0343080825056725 | ARF3/ATP6V0B/DYNLL1/EIF3J/MTX1/VIM |
| AML1 | 0.0343080825056725 | ARF3/ATP6V0B/DYNLL1/EIF3J/MTX1/VIM |
| TASOR | 0.0407822546538425 | ANTKMT/CDK2AP2/CYCS/EPRS1/MPG/TXNL1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_9_2 | R-HSA-376176 | Signaling by ROBO receptors | 6/67 | 219/11146 | 0.00197590800424704 | 0.0446080959289121 | 0.0369927545600119 | GSPT1/PSMC2/PSMD12/RPL22L1/RPL36AL/RPS27L | 6 |
| reactome | B_9_2 | R-HSA-379724 | tRNA Aminoacylation | 3/67 | 42/11146 | 0.0020156899928585 | 0.0446080959289121 | 0.0369927545600119 | EPRS1/GARS1/TARS1 | 3 |
| GO | B_9_2 | GO:0140534 | endoplasmic reticulum protein-containing complex | 4/92 | 116/19960 | 0.00204193470328303 | 0.0263073281294206 | 0.0214351715654825 | DPM2/SEC11A/TAP1/VCP | 4 |
| GO | B_9_2 | GO:1902495 | transmembrane transporter complex | 8/92 | 499/19960 | 0.00214111074270753 | 0.0263073281294206 | 0.0214351715654825 | ATP5MG/ATP6V0B/COX5A/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2 | 8 |
| reactome | B_9_2 | R-HSA-9646399 | Aggrephagy | 3/67 | 43/11146 | 0.00215761413418954 | 0.0457593997626033 | 0.037947511746053 | DYNLL1/VCP/VIM | 3 |
| GO | B_9_2 | GO:0000315 | organellar large ribosomal subunit | 3/92 | 56/19960 | 0.00220145005267118 | 0.0263073281294206 | 0.0214351715654825 | MRPL24/MRPL40/MRPL52 | 3 |
| GO | B_9_2 | GO:0005762 | mitochondrial large ribosomal subunit | 3/92 | 56/19960 | 0.00220145005267118 | 0.0263073281294206 | 0.0214351715654825 | MRPL24/MRPL40/MRPL52 | 3 |
| reactome | B_9_2 | R-HSA-5368287 | Mitochondrial translation | 4/67 | 93/11146 | 0.00233087059650975 | 0.0463707684592396 | 0.0384545096725366 | MRPL24/MRPL40/MRPL52/MRPS28 | 4 |
| KEGG | B_9_2 | hsa05170 | Human immunodeficiency virus 1 infection | 6/55 | 213/8541 | 0.00234621910757687 | 0.0249060182188929 | 0.0222273389138861 | APOBEC3C/BID/CYCS/GNG5/RPS6KB2/TAP1 | 6 |
| GO | B_9_2 | GO:0005852 | eukaryotic translation initiation factor 3 complex | 2/92 | 16/19960 | 0.00241793961443392 | 0.0275184556118908 | 0.0224219964245752 | EIF3A/EIF3J | 2 |