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Selected Module: B_9_2
Module Info
| Module_Name | B_9_2 |
| Cell_Type | B |
| Name | B_9_2: ATP biosynthetic process |
| Meta_Module | B_3 |
| Gene_Number | 93 |
Genes:
ANKRD39, ANTKMT, ANXA2, ANXA5, APOBEC3C, ARF3, ATOX1, ATP5MG, ATP6V0B, BID, CD320, CD99, CDK2AP2, CINP, COX5A, CYCS, DAZAP1, DDRGK1, DESI1, DPM2, DYNLL1, EI24, EIF3A, EIF3J, EIF5B, EPRS1, ERP29, EXOSC4, FAM174C, FLOT1, GARS1, GCDH, GEMIN7, GFUS, GNG5, GSPT1, GYG1, H2AJ, HINT2, HMGN3, LRRC59, LSM3, MPG, MRPL24, MRPL40, MRPL52, MRPS28, MTX1, MYL6, NAA10, NDUFA1, NDUFA3, NDUFB11, NDUFB4, NDUFS2, NTAN1, NUDT2, PARP1, PEBP1, PSMC2, PSMD12, RALY, RNASEH1, RNPEP, ROMO1, RPL22L1, RPL36AL, RPS27L, RPS6KB2, RTCA, SEC11A, SERF2, SND1, SRM, TAP1, TARS1, TMED3, TMX2, TOR3A, TPM4, TSEN15, TXNL1, UCHL3, UFC1, UQCC5, VCP, VIM, YWHAG, ZDHHC12, ZNF593, ZNF706, ZNG1A, ZNRD2
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| IRX2 | 0.00722520263260075 | ANXA2/ATP6V0B/NUDT2/PSMC2/SERF2/TARS1/UCHL3 |
| CETS1P54 | 0.0343080825056725 | ARF3/GSPT1/MRPL52/PSMC2/PSMD12/UFC1 |
| AML1 | 0.0343080825056725 | ARF3/ATP6V0B/DYNLL1/EIF3J/MTX1/VIM |
| AML1 | 0.0343080825056725 | ARF3/ATP6V0B/DYNLL1/EIF3J/MTX1/VIM |
| TASOR | 0.0407822546538425 | ANTKMT/CDK2AP2/CYCS/EPRS1/MPG/TXNL1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_9_2 | GO:0045006 | DNA deamination | 2/90 | 13/18986 | 0.00167541660382882 | 0.042014293296015 | 0.0394435123532979 | APOBEC3C/EXOSC4 | 2 |
| GO | B_9_2 | GO:0042470 | melanosome | 4/92 | 112/19960 | 0.00179607974948301 | 0.0263073281294206 | 0.0214351715654825 | ANXA2/ERP29/FLOT1/SND1 | 4 |
| GO | B_9_2 | GO:0048770 | pigment granule | 4/92 | 112/19960 | 0.00179607974948301 | 0.0263073281294206 | 0.0214351715654825 | ANXA2/ERP29/FLOT1/SND1 | 4 |
| reactome | B_9_2 | R-HSA-5368286 | Mitochondrial translation initiation | 4/67 | 87/11146 | 0.00182543465024362 | 0.044245058903524 | 0.0366916939723154 | MRPL24/MRPL40/MRPL52/MRPS28 | 4 |
| reactome | B_9_2 | R-HSA-5389840 | Mitochondrial translation elongation | 4/67 | 87/11146 | 0.00182543465024362 | 0.044245058903524 | 0.0366916939723154 | MRPL24/MRPL40/MRPL52/MRPS28 | 4 |
| reactome | B_9_2 | R-HSA-5419276 | Mitochondrial translation termination | 4/67 | 87/11146 | 0.00182543465024362 | 0.044245058903524 | 0.0366916939723154 | MRPL24/MRPL40/MRPL52/MRPS28 | 4 |
| KEGG | B_9_2 | hsa05169 | Epstein-Barr virus infection | 6/55 | 204/8541 | 0.00188678087183148 | 0.021697980026062 | 0.0193643300003757 | BID/CYCS/PSMC2/PSMD12/TAP1/VIM | 6 |
| GO | B_9_2 | GO:0015934 | large ribosomal subunit | 4/92 | 114/19960 | 0.00191627573833861 | 0.0263073281294206 | 0.0214351715654825 | MRPL24/MRPL40/MRPL52/RPL36AL | 4 |
| GO | B_9_2 | GO:0001765 | membrane raft assembly | 2/90 | 14/18986 | 0.00194863542718129 | 0.0479437848498943 | 0.0450101887152302 | ANXA2/FLOT1 | 2 |
| GO | B_9_2 | GO:0003743 | translation initiation factor activity | 3/91 | 51/18737 | 0.00194983588951201 | 0.0321722921769482 | 0.0273233581885565 | EIF3A/EIF3J/EIF5B | 3 |