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Selected Module: B_9_2
Module Info
| Module_Name | B_9_2 |
| Cell_Type | B |
| Name | B_9_2: ATP biosynthetic process |
| Meta_Module | B_3 |
| Gene_Number | 93 |
Genes:
ANKRD39, ANTKMT, ANXA2, ANXA5, APOBEC3C, ARF3, ATOX1, ATP5MG, ATP6V0B, BID, CD320, CD99, CDK2AP2, CINP, COX5A, CYCS, DAZAP1, DDRGK1, DESI1, DPM2, DYNLL1, EI24, EIF3A, EIF3J, EIF5B, EPRS1, ERP29, EXOSC4, FAM174C, FLOT1, GARS1, GCDH, GEMIN7, GFUS, GNG5, GSPT1, GYG1, H2AJ, HINT2, HMGN3, LRRC59, LSM3, MPG, MRPL24, MRPL40, MRPL52, MRPS28, MTX1, MYL6, NAA10, NDUFA1, NDUFA3, NDUFB11, NDUFB4, NDUFS2, NTAN1, NUDT2, PARP1, PEBP1, PSMC2, PSMD12, RALY, RNASEH1, RNPEP, ROMO1, RPL22L1, RPL36AL, RPS27L, RPS6KB2, RTCA, SEC11A, SERF2, SND1, SRM, TAP1, TARS1, TMED3, TMX2, TOR3A, TPM4, TSEN15, TXNL1, UCHL3, UFC1, UQCC5, VCP, VIM, YWHAG, ZDHHC12, ZNF593, ZNF706, ZNG1A, ZNRD2
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| IRX2 | 0.00722520263260075 | ANXA2/ATP6V0B/NUDT2/PSMC2/SERF2/TARS1/UCHL3 |
| CETS1P54 | 0.0343080825056725 | ARF3/GSPT1/MRPL52/PSMC2/PSMD12/UFC1 |
| AML1 | 0.0343080825056725 | ARF3/ATP6V0B/DYNLL1/EIF3J/MTX1/VIM |
| AML1 | 0.0343080825056725 | ARF3/ATP6V0B/DYNLL1/EIF3J/MTX1/VIM |
| TASOR | 0.0407822546538425 | ANTKMT/CDK2AP2/CYCS/EPRS1/MPG/TXNL1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_9_2 | D022021 | Tacrolimus Binding Proteins | 8/93 | 486/26076 | 0.00035045594193526 | 0.0463874245991889 | 0.0403470036626797 | EPRS1/LRRC59/MYL6/PSMC2/PSMD12/RPS27L/VIM/YWHAG | 8 |
| MeSH_gene2pubmed | B_9_2 | D001059 | Apoproteins | 5/93 | 169/26076 | 0.00035354023194046 | 0.0463874245991889 | 0.0403470036626797 | ANXA2/ATOX1/CYCS/DYNLL1/GYG1 | 5 |
| reactome | B_9_2 | R-HSA-72689 | Formation of a pool of free 40S subunits | 5/67 | 102/11146 | 0.00035827134450527 | 0.0150311410843032 | 0.0124650761551144 | EIF3A/EIF3J/RPL22L1/RPL36AL/RPS27L | 5 |
| KEGG | B_9_2 | hsa04723 | Retrograde endocannabinoid signaling | 6/55 | 149/8541 | 0.00036525138345089 | 0.00458224462874755 | 0.00408941740323008 | GNG5/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2 | 6 |
| reactome | B_9_2 | R-HSA-379716 | Cytosolic tRNA aminoacylation | 3/67 | 24/11146 | 0.00038389947759517 | 0.0150311410843032 | 0.0124650761551144 | EPRS1/GARS1/TARS1 | 3 |
| GO | B_9_2 | GO:0032543 | mitochondrial translation | 5/90 | 131/18986 | 0.00039818860614126 | 0.0112877813567001 | 0.0105971018064597 | GARS1/MRPL24/MRPL40/MRPL52/MRPS28 | 5 |
| MeSH_gene2pubmed | B_9_2 | D001678 | Organelle Biogenesis | 4/93 | 97/26076 | 0.00040771315444886 | 0.0496964226576438 | 0.0432251146580164 | ANXA2/ERP29/FLOT1/SND1 | 4 |
| MeSH_gene2pubmed | B_9_2 | D015852 | Eukaryotic Initiation Factor-2 | 6/93 | 269/26076 | 0.00041032295620791 | 0.0496964226576438 | 0.0432251146580164 | EIF3A/EIF3J/EIF5B/PARP1/SND1/VIM | 6 |
| reactome | B_9_2 | R-HSA-156827 | L13a-mediated translational silencing of Ceruloplasmin expression | 5/67 | 112/11146 | 0.00055100961738381 | 0.0192339494410751 | 0.015950395462457 | EIF3A/EIF3J/RPL22L1/RPL36AL/RPS27L | 5 |
| reactome | B_9_2 | R-HSA-9010553 | Regulation of expression of SLITs and ROBOs | 6/67 | 172/11146 | 0.00056681579885289 | 0.0192339494410751 | 0.015950395462457 | GSPT1/PSMC2/PSMD12/RPL22L1/RPL36AL/RPS27L | 6 |