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Selected Module: B_9_2
Module Info
| Module_Name | B_9_2 |
| Cell_Type | B |
| Name | B_9_2: ATP biosynthetic process |
| Meta_Module | B_3 |
| Gene_Number | 93 |
Genes:
ANKRD39, ANTKMT, ANXA2, ANXA5, APOBEC3C, ARF3, ATOX1, ATP5MG, ATP6V0B, BID, CD320, CD99, CDK2AP2, CINP, COX5A, CYCS, DAZAP1, DDRGK1, DESI1, DPM2, DYNLL1, EI24, EIF3A, EIF3J, EIF5B, EPRS1, ERP29, EXOSC4, FAM174C, FLOT1, GARS1, GCDH, GEMIN7, GFUS, GNG5, GSPT1, GYG1, H2AJ, HINT2, HMGN3, LRRC59, LSM3, MPG, MRPL24, MRPL40, MRPL52, MRPS28, MTX1, MYL6, NAA10, NDUFA1, NDUFA3, NDUFB11, NDUFB4, NDUFS2, NTAN1, NUDT2, PARP1, PEBP1, PSMC2, PSMD12, RALY, RNASEH1, RNPEP, ROMO1, RPL22L1, RPL36AL, RPS27L, RPS6KB2, RTCA, SEC11A, SERF2, SND1, SRM, TAP1, TARS1, TMED3, TMX2, TOR3A, TPM4, TSEN15, TXNL1, UCHL3, UFC1, UQCC5, VCP, VIM, YWHAG, ZDHHC12, ZNF593, ZNF706, ZNG1A, ZNRD2
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| IRX2 | 0.00722520263260075 | ANXA2/ATP6V0B/NUDT2/PSMC2/SERF2/TARS1/UCHL3 |
| CETS1P54 | 0.0343080825056725 | ARF3/GSPT1/MRPL52/PSMC2/PSMD12/UFC1 |
| AML1 | 0.0343080825056725 | ARF3/ATP6V0B/DYNLL1/EIF3J/MTX1/VIM |
| AML1 | 0.0343080825056725 | ARF3/ATP6V0B/DYNLL1/EIF3J/MTX1/VIM |
| TASOR | 0.0407822546538425 | ANTKMT/CDK2AP2/CYCS/EPRS1/MPG/TXNL1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_9_2 | D002939 | Ciprofloxacin | 5/93 | 141/26076 | 0.00015271495116073 | 0.0300562113253213 | 0.0261423883500146 | ANXA2/ANXA5/PEBP1/PSMC2/VCP | 5 |
| MeSH_gene2pubmed | B_9_2 | D006200 | Hair Color | 5/93 | 143/26076 | 0.0001631086322445 | 0.0302134754669384 | 0.0262791740619324 | ANXA2/ERP29/FLOT1/RALY/SND1 | 5 |
| hallmark | B_9_2 | HALLMARK_OXIDATIVE_PHOSPHORYLATION | HALLMARK_OXIDATIVE_PHOSPHORYLATION | 8/36 | 200/4384 | 0.00016362141519491 | 0.00458139962545766 | 0.0043058267156557 | ATP5MG/ATP6V0B/COX5A/CYCS/NDUFA1/NDUFA3/NDUFB4/NDUFS2 | 8 |
| KEGG | B_9_2 | hsa05010 | Alzheimer disease | 10/55 | 391/8541 | 0.00016586753496096 | 0.00286121497807662 | 0.00255348705137273 | BID/COX5A/CYCS/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2/PSMC2/PSMD12 | 10 |
| GO | B_9_2 | GO:0098798 | mitochondrial protein-containing complex | 6/92 | 178/19960 | 0.00017476535312411 | 0.00588851398698769 | 0.00479795237873915 | MRPL24/MRPL40/MRPL52/MRPS28/MTX1/ROMO1 | 6 |
| GO | B_9_2 | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4/91 | 58/18737 | 0.00018076171358096 | 0.00747278614111958 | 0.00634650497630969 | NDUFA1/NDUFA3/NDUFB4/NDUFS2 | 4 |
| GO | B_9_2 | GO:0090079 | translation regulator activity, nucleic acid binding | 5/91 | 110/18737 | 0.00019814205677211 | 0.00747278614111958 | 0.00634650497630969 | EIF3A/EIF3J/EIF5B/GSPT1/RPS27L | 5 |
| KEGG | B_9_2 | hsa05022 | Pathways of neurodegeneration - multiple diseases | 11/55 | 483/8541 | 0.00020883283562699 | 0.00320210347961392 | 0.0028577124875273 | BID/COX5A/CYCS/NDUFA1/NDUFA3/NDUFB11/NDUFB4/NDUFS2/PSMC2/PSMD12/VCP | 11 |
| MeSH_gene2pubmed | B_9_2 | D009052 | Leukemia Virus, Murine | 5/93 | 152/26076 | 0.0002167313635307 | 0.0379159479865667 | 0.0329786554331523 | APOBEC3C/PSMC2/PSMD12/RNASEH1/TAP1 | 5 |
| GO | B_9_2 | GO:0000502 | proteasome complex | 4/92 | 64/19960 | 0.00021736444881741 | 0.00588851398698769 | 0.00479795237873915 | PSMC2/PSMD12/TXNL1/VCP | 4 |