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Selected Module: B_9_1
Module Info
| Module_Name | B_9_1 |
| Cell_Type | B |
| Name | B_9_1: alternative mRNA splicing, via spliceosome |
| Meta_Module | B_6 |
| Gene_Number | 61 |
Genes:
APC, ARID4A, ARID4B, ASH1L, CDK13, CELF1, CLEC2D, CNTRL, CREBRF, CSNK1G3, DDX17, DDX5, DGKD, DMTF1, EPC1, EZH1, FRYL, GPATCH8, HMBOX1, INO80D, KDM7A, LNPEP, MARF1, MYCBP2, NEMF, NIPBL, PCF11, PCMTD1, PHC3, PHF3, PNN, PUM1, RABEP1, RBM33, RBM5, RBM6, RC3H2, RERE, RPS6KA5, SENP6, SENP7, SHPRH, SP100, STIM2, TMX4, TRIM38, TRIM56, TTC17, UHRF2, USP34, USP6NL, WAC, YTHDC1, ZBED5, ZMYM2, ZNF431, ZNF451, ZNF506, ZNF644, ZNF800, ZNF91
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| NFMUE1 | 9.59622954380021e-07 | ASH1L/CELF1/EPC1/PCF11/PHC3/RBM5/ZBED5/ZMYM2/ZNF644 |
| KCCGNSWTTT | 9.59622954380021e-07 | CELF1/DDX17/DDX5/DMTF1/LNPEP/NIPBL/PCF11 |
| E2F | 8.10598095340964e-06 | ARID4A/DDX17/EPC1/NIPBL/RPS6KA5/YTHDC1/ZMYM2/ZNF644 |
| GCCATNTTG | 5.39602946612284e-05 | ARID4A/CELF1/DDX17/EPC1/HMBOX1/PCF11/PUM1/RBM5/TTC17 |
| E2F | 8.1908384515829e-05 | ARID4A/DDX17/NIPBL/RPS6KA5/YTHDC1/ZMYM2/ZNF644 |
| YY1 | 0.00010298200407859 | ARID4A/ASH1L/EPC1/INO80D/PCF11/PHC3/PUM1 |
| SMTTTTGT | 0.00020406895574873 | ARID4A/DDX17/DDX5/EPC1/NIPBL/PCF11/RBM5/ZMYM2 |
| ETF | 0.00038828502377749 | ASH1L/EPC1/RERE/WAC/ZNF644 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| hallmark | B_9_1 | HALLMARK_TGF_BETA_SIGNALING | HALLMARK_TGF_BETA_SIGNALING | 2/14 | 54/4384 | 0.0123272569456466 | 0.0410505500529946 | 0.0185190451366893 | APC/ARID4B | 2 |
| hallmark | B_9_1 | HALLMARK_G2M_CHECKPOINT | HALLMARK_G2M_CHECKPOINT | 3/14 | 200/4384 | 0.0234574571731398 | 0.0410505500529946 | 0.0185190451366893 | ARID4A/RPS6KA5/YTHDC1 | 3 |
| hallmark | B_9_1 | HALLMARK_HEME_METABOLISM | HALLMARK_HEME_METABOLISM | 3/14 | 200/4384 | 0.0234574571731398 | 0.0410505500529946 | 0.0185190451366893 | EZH1/KDM7A/RBM5 | 3 |