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Selected Module: B_8_2
Module Info
| Module_Name | B_8_2 |
| Cell_Type | B |
| Name | B_8_2: Mitochondrial Diseases |
| Meta_Module | B_3 |
| Gene_Number | 48 |
Genes:
ABRACL, ANAPC5, AP1S1, C1orf43, CBR1, COMMD4, DDX1, DDX49, DPM1, EIF4E2, FH, FUNDC2, IDH3A, MRPL14, MRPL28, MRPL3, MRPL32, MRPL58, MRPS18A, NABP2, NDUFA11, NDUFA8, NDUFAF3, NDUFB9, NDUFS3, NDUFS7, NDUFV1, PFDN6, POLR2E, PPP1R7, PSMA1, PSMB5, PSMC1, PSMD9, RNH1, RUVBL2, SKA2, SLC25A39, SLX9, SRPK1, STARD7, TALDO1, TIMM44, TPGS2, TPI1, USP14, VPS25, ZCRB1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| RLF | 4.65826687298153e-05 | ANAPC5/EIF4E2/MRPL3/MRPL58/NDUFS3/NDUFS7/PSMA1/SLX9 |
| ALKBH3 | 0.00163190543184927 | DDX1/EIF4E2/MRPL3/MRPL58/NDUFS7/SLX9/VPS25 |
| ZNF85 | 0.0251523044088028 | ABRACL/NABP2/NDUFS3/NDUFS7/VPS25 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_8_2 | D007521 | Isocitrate Dehydrogenase | 2/48 | 49/26076 | 0.00369254451175667 | 0.0460561006375468 | 0.0393635845559515 | IDH3A/NDUFS3 | 2 |
| MeSH_gene2pubmed | B_8_2 | D017237 | Mitochondrial Encephalomyopathies | 2/48 | 50/26076 | 0.00384190207184488 | 0.0470633003800997 | 0.0402244258273984 | FH/NDUFS7 | 2 |
| reactome | B_8_2 | R-HSA-5619115 | Disorders of transmembrane transporters | 4/41 | 176/11146 | 0.00385820890233871 | 0.0106343909240933 | 0.00624548632576722 | PSMA1/PSMB5/PSMC1/PSMD9 | 4 |
| reactome | B_8_2 | R-HSA-68886 | M Phase | 6/41 | 417/11146 | 0.00391663583569016 | 0.0107054712842198 | 0.00628723120992369 | ANAPC5/PSMA1/PSMB5/PSMC1/PSMD9/SKA2 | 6 |
| reactome | B_8_2 | R-HSA-109581 | Apoptosis | 4/41 | 180/11146 | 0.0041799710098668 | 0.0113308305060852 | 0.00665449930235429 | PSMA1/PSMB5/PSMC1/PSMD9 | 4 |
| GO | B_8_2 | GO:0101031 | protein folding chaperone complex | 2/47 | 42/19960 | 0.00440052763257641 | 0.0258030938455617 | 0.0183179858389544 | PFDN6/RUVBL2 | 2 |
| reactome | B_8_2 | R-HSA-5688426 | Deubiquitination | 5/41 | 297/11146 | 0.0044358614849051 | 0.0119259226807285 | 0.00700399181827122 | PSMA1/PSMB5/PSMC1/PSMD9/USP14 | 5 |
| KEGG | B_8_2 | hsa00020 | Citrate cycle (TCA cycle) | 2/29 | 30/8541 | 0.00456541121964313 | 0.0136962336589294 | 0.00961139204135396 | FH/IDH3A | 2 |
| reactome | B_8_2 | R-HSA-983168 | Antigen processing: Ubiquitination & Proteasome degradation | 5/41 | 309/11146 | 0.00524266124214473 | 0.0139804299790526 | 0.00821058628423179 | ANAPC5/PSMA1/PSMB5/PSMC1/PSMD9 | 5 |
| reactome | B_8_2 | R-HSA-69275 | G2/M Transition | 4/41 | 197/11146 | 0.00575091857846888 | 0.0152121072075628 | 0.00893393972716303 | PSMA1/PSMB5/PSMC1/PSMD9 | 4 |