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Selected Module: B_8_2
Module Info
| Module_Name | B_8_2 |
| Cell_Type | B |
| Name | B_8_2: Mitochondrial Diseases |
| Meta_Module | B_3 |
| Gene_Number | 48 |
Genes:
ABRACL, ANAPC5, AP1S1, C1orf43, CBR1, COMMD4, DDX1, DDX49, DPM1, EIF4E2, FH, FUNDC2, IDH3A, MRPL14, MRPL28, MRPL3, MRPL32, MRPL58, MRPS18A, NABP2, NDUFA11, NDUFA8, NDUFAF3, NDUFB9, NDUFS3, NDUFS7, NDUFV1, PFDN6, POLR2E, PPP1R7, PSMA1, PSMB5, PSMC1, PSMD9, RNH1, RUVBL2, SKA2, SLC25A39, SLX9, SRPK1, STARD7, TALDO1, TIMM44, TPGS2, TPI1, USP14, VPS25, ZCRB1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| RLF | 4.65826687298153e-05 | ANAPC5/EIF4E2/MRPL3/MRPL58/NDUFS3/NDUFS7/PSMA1/SLX9 |
| ALKBH3 | 0.00163190543184927 | DDX1/EIF4E2/MRPL3/MRPL58/NDUFS7/SLX9/VPS25 |
| ZNF85 | 0.0251523044088028 | ABRACL/NABP2/NDUFS3/NDUFS7/VPS25 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_8_2 | R-HSA-5358351 | Signaling by Hedgehog | 4/41 | 149/11146 | 0.00211511265391377 | 0.00598066336623894 | 0.00351239215668076 | PSMA1/PSMB5/PSMC1/PSMD9 | 4 |
| MeSH_gene2pubmed | B_8_2 | D010427 | Pentose Phosphate Pathway | 2/48 | 40/26076 | 0.00247508283233318 | 0.0332628849640769 | 0.0284293799677625 | TALDO1/TPI1 | 2 |
| MeSH_gene2pubmed | B_8_2 | D011828 | Radiation Chimera | 3/48 | 147/26076 | 0.00252138486608163 | 0.0332628849640769 | 0.0284293799677625 | NDUFA8/NDUFB9/NDUFS3 | 3 |
| GO | B_8_2 | GO:0042180 | cellular ketone metabolic process | 4/47 | 237/18986 | 0.00277240996248716 | 0.0388137394748203 | 0.0320381471637532 | CBR1/FH/STARD7/TPI1 | 4 |
| MeSH_gene2pubmed | B_8_2 | D035602 | Transcriptional Elongation Factors | 3/48 | 157/26076 | 0.00303654981856686 | 0.0393032674629598 | 0.0335920208330038 | POLR2E/SRPK1/VPS25 | 3 |
| reactome | B_8_2 | R-HSA-69481 | G2/M Checkpoints | 4/41 | 167/11146 | 0.00319677703111818 | 0.00896190483937404 | 0.00526324963288013 | PSMA1/PSMB5/PSMC1/PSMD9 | 4 |
| GO | B_8_2 | GO:0006099 | tricarboxylic acid cycle | 2/47 | 34/18986 | 0.00319926070816679 | 0.0429234145012378 | 0.0354304091584261 | FH/IDH3A | 2 |
| GO | B_8_2 | GO:0072344 | rescue of stalled ribosome | 2/47 | 34/18986 | 0.00319926070816679 | 0.0429234145012378 | 0.0354304091584261 | EIF4E2/MRPL58 | 2 |
| MeSH_gene2pubmed | B_8_2 | D014774 | Virulence | 4/48 | 338/26076 | 0.00344411026898091 | 0.0437529563800167 | 0.0373951153961475 | PSMA1/PSMB5/PSMC1/PSMD9 | 4 |
| reactome | B_8_2 | R-HSA-9010553 | Regulation of expression of SLITs and ROBOs | 4/41 | 172/11146 | 0.00355374327512011 | 0.00987820164609657 | 0.00580138286660999 | PSMA1/PSMB5/PSMC1/PSMD9 | 4 |