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Selected Module: B_8_2


Module Info

Module_Name B_8_2
Cell_Type B
Name B_8_2: Mitochondrial Diseases
Meta_Module B_3
Gene_Number 48

Genes:

ABRACL, ANAPC5, AP1S1, C1orf43, CBR1, COMMD4, DDX1, DDX49, DPM1, EIF4E2, FH, FUNDC2, IDH3A, MRPL14, MRPL28, MRPL3, MRPL32, MRPL58, MRPS18A, NABP2, NDUFA11, NDUFA8, NDUFAF3, NDUFB9, NDUFS3, NDUFS7, NDUFV1, PFDN6, POLR2E, PPP1R7, PSMA1, PSMB5, PSMC1, PSMD9, RNH1, RUVBL2, SKA2, SLC25A39, SLX9, SRPK1, STARD7, TALDO1, TIMM44, TPGS2, TPI1, USP14, VPS25, ZCRB1


UMAP Visualizations


UMAP for B_8_2

UMAP for B_8_2


Word Cloud

Enriched TF

Wordcloud for B_8_2
TF p.adjust Genes
RLF 4.65826687298153e-05 ANAPC5/EIF4E2/MRPL3/MRPL58/NDUFS3/NDUFS7/PSMA1/SLX9
ALKBH3 0.00163190543184927 DDX1/EIF4E2/MRPL3/MRPL58/NDUFS7/SLX9/VPS25
ZNF85 0.0251523044088028 ABRACL/NABP2/NDUFS3/NDUFS7/VPS25


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
reactome B_8_2 R-HSA-6807070 PTEN Regulation 4/41 140/11146 0.00168380831507133 0.00497557772381437 0.00292211400339547 PSMA1/PSMB5/PSMC1/PSMD9 4
MeSH_gene2pubmed B_8_2 D005649 Fumarate Hydratase 2/48 33/26076 0.00168924318736094 0.0246557622665874 0.0210729777236292 FH/NDUFS3 2
MeSH_gene2pubmed B_8_2 D016192 Resting Phase, Cell Cycle 5/48 473/26076 0.0017325035647967 0.0247603634468862 0.0211623790699948 ANAPC5/PSMA1/PSMB5/PSMC1/PSMD9 5
reactome B_8_2 R-HSA-5621481 C-type lectin receptors (CLRs) 4/41 143/11146 0.00182002027033426 0.00533005936312177 0.00313029802134558 PSMA1/PSMB5/PSMC1/PSMD9 4
MeSH_gene2pubmed B_8_2 D005095 Exoribonucleases 4/48 287/26076 0.00191082907444591 0.0267516070422428 0.0228642705578169 NDUFAF3/PSMB5/RUVBL2/TALDO1 4
MeSH_gene2pubmed B_8_2 D022021 Tacrolimus Binding Proteins 5/48 486/26076 0.0019501580748301 0.026756168786669 0.0228681694248498 PFDN6/POLR2E/PSMB5/PSMC1/RUVBL2 5
reactome B_8_2 R-HSA-3858494 Beta-catenin independent WNT signaling 4/41 146/11146 0.0019637180745376 0.00566700043899142 0.00332818061725106 PSMA1/PSMB5/PSMC1/PSMD9 4
reactome B_8_2 R-HSA-8951664 Neddylation 5/41 246/11146 0.00196962820135678 0.00566700043899142 0.00332818061725106 COMMD4/PSMA1/PSMB5/PSMC1/PSMD9 5
KEGG B_8_2 hsa01230 Biosynthesis of amino acids 3/29 75/8541 0.00201683719778766 0.00640642404003139 0.00449573616844308 IDH3A/TALDO1/TPI1 3
reactome B_8_2 R-HSA-453279 Mitotic G1 phase and G1/S transition 4/41 149/11146 0.00211511265391377 0.00598066336623894 0.00351239215668076 PSMA1/PSMB5/PSMC1/PSMD9 4