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Selected Module: B_8_2
Module Info
| Module_Name | B_8_2 |
| Cell_Type | B |
| Name | B_8_2: Mitochondrial Diseases |
| Meta_Module | B_3 |
| Gene_Number | 48 |
Genes:
ABRACL, ANAPC5, AP1S1, C1orf43, CBR1, COMMD4, DDX1, DDX49, DPM1, EIF4E2, FH, FUNDC2, IDH3A, MRPL14, MRPL28, MRPL3, MRPL32, MRPL58, MRPS18A, NABP2, NDUFA11, NDUFA8, NDUFAF3, NDUFB9, NDUFS3, NDUFS7, NDUFV1, PFDN6, POLR2E, PPP1R7, PSMA1, PSMB5, PSMC1, PSMD9, RNH1, RUVBL2, SKA2, SLC25A39, SLX9, SRPK1, STARD7, TALDO1, TIMM44, TPGS2, TPI1, USP14, VPS25, ZCRB1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| RLF | 4.65826687298153e-05 | ANAPC5/EIF4E2/MRPL3/MRPL58/NDUFS3/NDUFS7/PSMA1/SLX9 |
| ALKBH3 | 0.00163190543184927 | DDX1/EIF4E2/MRPL3/MRPL58/NDUFS7/SLX9/VPS25 |
| ZNF85 | 0.0251523044088028 | ABRACL/NABP2/NDUFS3/NDUFS7/VPS25 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_8_2 | R-HSA-69002 | DNA Replication Pre-Initiation | 5/41 | 158/11146 | 0.00026663689484811 | 0.00102890472364919 | 0.00060426689482606 | ANAPC5/PSMA1/PSMB5/PSMC1/PSMD9 | 5 |
| WikiPathways | B_8_2 | WP4290 | Metabolic reprogramming in colon cancer | 3/27 | 42/8836 | 0.0002698233660602 | 0.00247338085555184 | 0.0017514850077592 | FH/IDH3A/TALDO1 | 3 |
| reactome | B_8_2 | R-HSA-450531 | Regulation of mRNA stability by proteins that bind AU-rich elements | 4/41 | 88/11146 | 0.00029394784400481 | 0.0011211034050416 | 0.00065841438742815 | PSMA1/PSMB5/PSMC1/PSMD9 | 4 |
| reactome | B_8_2 | R-HSA-69242 | S Phase | 5/41 | 162/11146 | 0.00029937889967595 | 0.00112869286314612 | 0.00066287161089775 | ANAPC5/PSMA1/PSMB5/PSMC1/PSMD9 | 5 |
| reactome | B_8_2 | R-HSA-5687128 | MAPK6/MAPK4 signaling | 4/41 | 89/11146 | 0.00030696579355103 | 0.00114414523050841 | 0.00067194665334736 | PSMA1/PSMB5/PSMC1/PSMD9 | 4 |
| GO | B_8_2 | GO:0003954 | NADH dehydrogenase activity | 2/46 | 11/18737 | 0.00031976827421296 | 0.00486758372968621 | 0.00340338163197422 | NDUFS3/NDUFS7 | 2 |
| reactome | B_8_2 | R-HSA-1236974 | ER-Phagosome pathway | 4/41 | 90/11146 | 0.00032039277609597 | 0.00118077337707282 | 0.00069345804879437 | PSMA1/PSMB5/PSMC1/PSMD9 | 4 |
| MeSH_gene2pubmed | B_8_2 | D048748 | MAP Kinase Kinase Kinase 3 | 5/48 | 325/26076 | 0.0003218385693932 | 0.00712197608399152 | 0.00608706564183409 | PFDN6/POLR2E/PSMB5/PSMC1/RUVBL2 | 5 |
| reactome | B_8_2 | R-HSA-4086400 | PCP/CE pathway | 4/41 | 92/11146 | 0.00034850379664555 | 0.00127010272555267 | 0.00074592040685539 | PSMA1/PSMB5/PSMC1/PSMD9 | 4 |
| GO | B_8_2 | GO:0008540 | proteasome regulatory particle, base subcomplex | 2/47 | 12/19960 | 0.00035283504200289 | 0.00267739531872785 | 0.00190072127890105 | PSMC1/PSMD9 | 2 |