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Selected Module: B_8_2


Module Info

Module_Name B_8_2
Cell_Type B
Name B_8_2: Mitochondrial Diseases
Meta_Module B_3
Gene_Number 48

Genes:

ABRACL, ANAPC5, AP1S1, C1orf43, CBR1, COMMD4, DDX1, DDX49, DPM1, EIF4E2, FH, FUNDC2, IDH3A, MRPL14, MRPL28, MRPL3, MRPL32, MRPL58, MRPS18A, NABP2, NDUFA11, NDUFA8, NDUFAF3, NDUFB9, NDUFS3, NDUFS7, NDUFV1, PFDN6, POLR2E, PPP1R7, PSMA1, PSMB5, PSMC1, PSMD9, RNH1, RUVBL2, SKA2, SLC25A39, SLX9, SRPK1, STARD7, TALDO1, TIMM44, TPGS2, TPI1, USP14, VPS25, ZCRB1


UMAP Visualizations


UMAP for B_8_2

UMAP for B_8_2


Word Cloud

Enriched TF

Wordcloud for B_8_2
TF p.adjust Genes
RLF 4.65826687298153e-05 ANAPC5/EIF4E2/MRPL3/MRPL58/NDUFS3/NDUFS7/PSMA1/SLX9
ALKBH3 0.00163190543184927 DDX1/EIF4E2/MRPL3/MRPL58/NDUFS7/SLX9/VPS25
ZNF85 0.0251523044088028 ABRACL/NABP2/NDUFS3/NDUFS7/VPS25


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
GO B_8_2 GO:0032981 mitochondrial respiratory chain complex I assembly 6/47 62/18986 9.15365057778255e-09 2.94747548604598e-06 2.43294396935799e-06 NDUFA11/NDUFA8/NDUFAF3/NDUFB9/NDUFS3/NDUFS7 6
KEGG B_8_2 hsa05012 Parkinson disease 10/29 271/8541 1.03072093908877e-08 2.36982871127235e-07 1.66303769212095e-07 NDUFA11/NDUFA8/NDUFB9/NDUFS3/NDUFS7/NDUFV1/PSMA1/PSMB5/PSMC1/PSMD9 10
KEGG B_8_2 hsa05020 Prion disease 10/29 278/8541 1.31657150626242e-08 2.36982871127235e-07 1.66303769212095e-07 NDUFA11/NDUFA8/NDUFB9/NDUFS3/NDUFS7/NDUFV1/PSMA1/PSMB5/PSMC1/PSMD9 10
GO B_8_2 GO:0042776 proton motive force-driven mitochondrial ATP synthesis 6/47 68/18986 1.61174760164834e-08 3.45988485153844e-06 2.85590364502601e-06 NDUFA11/NDUFA8/NDUFB9/NDUFS3/NDUFS7/NDUFV1 6
WikiPathways B_8_2 WP623 Oxidative phosphorylation 6/27 60/8836 2.0111267243942e-08 1.10611969841681e-06 7.83280934764058e-07 NDUFA11/NDUFA8/NDUFB9/NDUFS3/NDUFS7/NDUFV1 6
MeSH_gene2pubmed B_8_2 D007888 Leigh Disease 5/48 47/26076 2.46858212421777e-08 5.64482445737797e-06 4.82456225680456e-06 NDUFA11/NDUFA8/NDUFS3/NDUFS7/NDUFV1 5
GO B_8_2 GO:0009060 aerobic respiration 8/47 200/18986 2.91469511712399e-08 4.42238849408506e-06 3.65038605673905e-06 FH/IDH3A/NDUFA11/NDUFA8/NDUFB9/NDUFS3/NDUFS7/NDUFV1 8
GO B_8_2 GO:0015986 proton motive force-driven ATP synthesis 6/47 77/18986 3.43353143950703e-08 4.42238849408506e-06 3.65038605673905e-06 NDUFA11/NDUFA8/NDUFB9/NDUFS3/NDUFS7/NDUFV1 6
GO B_8_2 GO:0008137 NADH dehydrogenase (ubiquinone) activity 5/46 41/18737 5.00086431494463e-08 3.32161400579647e-06 2.32245005399523e-06 NDUFA8/NDUFB9/NDUFS3/NDUFS7/NDUFV1 5
GO B_8_2 GO:0000313 organellar ribosome 6/47 88/19960 5.7379126273143e-08 1.05973687740615e-06 7.5232238542909e-07 MRPL14/MRPL28/MRPL3/MRPL32/MRPL58/MRPS18A 6