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Selected Module: B_8_2
Module Info
| Module_Name | B_8_2 |
| Cell_Type | B |
| Name | B_8_2: Mitochondrial Diseases |
| Meta_Module | B_3 |
| Gene_Number | 48 |
Genes:
ABRACL, ANAPC5, AP1S1, C1orf43, CBR1, COMMD4, DDX1, DDX49, DPM1, EIF4E2, FH, FUNDC2, IDH3A, MRPL14, MRPL28, MRPL3, MRPL32, MRPL58, MRPS18A, NABP2, NDUFA11, NDUFA8, NDUFAF3, NDUFB9, NDUFS3, NDUFS7, NDUFV1, PFDN6, POLR2E, PPP1R7, PSMA1, PSMB5, PSMC1, PSMD9, RNH1, RUVBL2, SKA2, SLC25A39, SLX9, SRPK1, STARD7, TALDO1, TIMM44, TPGS2, TPI1, USP14, VPS25, ZCRB1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| RLF | 4.65826687298153e-05 | ANAPC5/EIF4E2/MRPL3/MRPL58/NDUFS3/NDUFS7/PSMA1/SLX9 |
| ALKBH3 | 0.00163190543184927 | DDX1/EIF4E2/MRPL3/MRPL58/NDUFS7/SLX9/VPS25 |
| ZNF85 | 0.0251523044088028 | ABRACL/NABP2/NDUFS3/NDUFS7/VPS25 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_8_2 | R-HSA-9759194 | Nuclear events mediated by NFE2L2 | 5/41 | 97/11146 | 2.6312389231759e-05 | 0.00039465663529736 | 0.0002317784475591 | PSMA1/PSMB5/PSMC1/PSMD9/TALDO1 | 5 |
| GO | B_8_2 | GO:0009117 | nucleotide metabolic process | 8/47 | 500/18986 | 2.78718943121511e-05 | 0.0004851216199196 | 0.00040043546593559 | NDUFA11/NDUFA8/NDUFB9/NDUFS3/NDUFS7/NDUFV1/TALDO1/TPI1 | 8 |
| MeSH_gene2pubmed | B_8_2 | D019065 | Virus Assembly | 5/48 | 194/26076 | 2.85873482620413e-05 | 0.00108949560598669 | 0.00093117853695655 | PSMA1/PSMB5/PSMC1/PSMD9/SRPK1 | 5 |
| reactome | B_8_2 | R-HSA-1236978 | Cross-presentation of soluble exogenous antigens (endosomes) | 4/41 | 49/11146 | 2.96201029972595e-05 | 0.00039465663529736 | 0.0002317784475591 | PSMA1/PSMB5/PSMC1/PSMD9 | 4 |
| GO | B_8_2 | GO:0009259 | ribonucleotide metabolic process | 7/47 | 368/18986 | 3.13198229877012e-05 | 0.00053078857905472 | 0.00043813048777809 | NDUFA11/NDUFA8/NDUFB9/NDUFS3/NDUFS7/NDUFV1/TPI1 | 7 |
| reactome | B_8_2 | R-HSA-211733 | Regulation of activated PAK-2p34 by proteasome mediated degradation | 4/41 | 50/11146 | 3.21103799684448e-05 | 0.00039465663529736 | 0.0002317784475591 | PSMA1/PSMB5/PSMC1/PSMD9 | 4 |
| WikiPathways | B_8_2 | WP183 | Proteasome degradation | 4/27 | 62/8836 | 3.41769126644312e-05 | 0.00037594603930874 | 0.00026622016180714 | PSMA1/PSMB5/PSMC1/PSMD9 | 4 |
| reactome | B_8_2 | R-HSA-350562 | Regulation of ornithine decarboxylase (ODC) | 4/41 | 51/11146 | 3.47507768360469e-05 | 0.00039465663529736 | 0.0002317784475591 | PSMA1/PSMB5/PSMC1/PSMD9 | 4 |
| GO | B_8_2 | GO:0019693 | ribose phosphate metabolic process | 7/47 | 376/18986 | 3.59157235812254e-05 | 0.00059306989708485 | 0.00048953955218674 | NDUFA11/NDUFA8/NDUFB9/NDUFS3/NDUFS7/NDUFV1/TPI1 | 7 |
| reactome | B_8_2 | R-HSA-180534 | Vpu mediated degradation of CD4 | 4/41 | 52/11146 | 3.75468428880581e-05 | 0.00039465663529736 | 0.0002317784475591 | PSMA1/PSMB5/PSMC1/PSMD9 | 4 |