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Selected Module: B_7_5
Module Info
| Module_Name | B_7_5 |
| Cell_Type | B |
| Name | B_7_5: protein-DNA complex organization |
| Meta_Module | B_6 |
| Gene_Number | 32 |
Genes:
ANKRD44, ARGLU1, ATF7IP, BDP1, BOD1L1, BPTF, CENPC, CHD2, CHD9, DDX6, FNBP4, GCC2, JMJD1C, KAT6A, MORC3, N4BP2L2, OGA, PJA2, PNISR, PRP4K, RICTOR, RSRP1, SCAF11, SETD2, SHOC2, STK4, TRIM44, TTC14, TUT4, USP15, USP8, VPS13C
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| YGCANTGCR | 0.00357951514611065 | CHD2/DDX6/OGA/USP8 |
| YY1 | 0.0185026382668809 | BPTF/CHD2/DDX6/SETD2 |
| ERR1 | 0.0185026382668809 | CHD2/JMJD1C/KAT6A/USP8 |
| HOXA10 | 0.0185026382668809 | CHD2/PJA2/RSRP1/USP8 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_7_5 | GO:0140993 | histone modifying activity | 5/31 | 438/18737 | 0.00070181582578009 | 0.0252653697280835 | 0.0162525770180654 | JMJD1C/KAT6A/PRP4K/SETD2/STK4 | 5 |
| WikiPathways | B_7_5 | WP5200 | Dravet syndrome | 2/15 | 29/8836 | 0.0010636024449059 | 0.0228674525654769 | 0.0184730950957341 | CHD2/RICTOR | 2 |
| GO | B_7_5 | GO:0008094 | ATP-dependent activity, acting on DNA | 3/31 | 123/18737 | 0.0010849597536362 | 0.0292939133481775 | 0.018844037826313 | BPTF/CHD2/CHD9 | 3 |
| GO | B_7_5 | GO:0140658 | ATP-dependent chromatin remodeler activity | 2/31 | 36/18737 | 0.00161147533667965 | 0.0348078672722804 | 0.0223910257307067 | CHD2/CHD9 | 2 |
| GO | B_7_5 | GO:0004386 | helicase activity | 3/31 | 154/18737 | 0.0020672301156008 | 0.0372101420808144 | 0.0239363487069566 | CHD2/CHD9/DDX6 | 3 |
| hallmark | B_7_5 | HALLMARK_COMPLEMENT | HALLMARK_COMPLEMENT | 2/3 | 200/4384 | 0.00602669020291458 | 0.0180800706087438 | 0.0126877688482412 | USP15/USP8 | 2 |