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Selected Module: B_7_4


Module Info

Module_Name B_7_4
Cell_Type B
Name B_7_4: RNA, Nuclear
Meta_Module B_1
Gene_Number 22

Genes:

NOP53, RPL13A, RPL17, RPL18A, RPL21, RPL23, RPL23A, RPL27, RPL27A, RPL31, RPL35, RPL37A, RPL38, RPL7, RPL9, RPS10, RPS11, RPS17, RPS20, RPS29, TPT1, UBA52


UMAP Visualizations


UMAP for B_7_4

UMAP for B_7_4


Word Cloud

Enriched TF

Wordcloud for B_7_4
TF p.adjust Genes
ZZZ3 2.02338402173262e-05 RPL17/RPL27/RPL37A/RPL7/RPS10/RPS20
NPM1 0.0116106518130812 RPL27A/RPL37A/RPS11/RPS20
EPC1 0.0116106518130812 RPL23A/RPS17/TPT1/UBA52
PER1 0.0116106518130812 RPL17/RPL21
MSX1 0.0156688509087623 RPL17/RPL21/RPS11
MCM3 0.017861168951138 NOP53/RPL13A/RPS11
ZNF532 0.025354117897857 RPL17/RPL21
CTR9 0.025354117897857 RPL9/TPT1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
reactome B_7_4 R-HSA-9679506 SARS-CoV Infections 6/20 414/11146 6.29950394405414e-05 0.0006537863552748 0.00050001752500458 RPS10/RPS11/RPS17/RPS20/RPS29/UBA52 6
GO B_7_4 GO:1990948 ubiquitin ligase inhibitor activity 2/22 11/18737 7.1919320665783e-05 0.00035959660332891 0.00015140909613849 RPL23/RPS20 2
MeSH_gene2pubmed B_7_4 D012347 RNA, Transfer, Arg 2/22 19/26076 0.00011518541327057 0.00181532211314421 0.00119792829801395 RPL23/RPL7 2
GO B_7_4 GO:0055105 ubiquitin-protein transferase inhibitor activity 2/22 15/18737 0.00013691028313081 0.00051341356174054 0.00021617413125917 RPL23/RPS20 2
MeSH_gene2pubmed B_7_4 D010458 Peptidyl Transferases 2/22 22/26076 0.00015536291407403 0.0023543456978912 0.00155362914074039 RPL27/RPL7 2
GO B_7_4 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 2/22 17/18986 0.00017248898956368 0.00460792014977264 0.00339790340343493 RPL35/RPL7 2
MeSH_gene2pubmed B_7_4 D018087 Plastids 2/22 25/26076 0.00020146087153494 0.00293983642165813 0.00193999357774395 RPL21/RPL27 2
MeSH_gene2pubmed B_7_4 D029503 Anemia, Diamond-Blackfan 2/22 27/26076 0.00023546841454999 0.00331337697616771 0.00218649242082133 RPL7/RPS17 2
GO B_7_4 GO:1901796 regulation of signal transduction by p53 class mediator 3/22 110/18986 0.00026893734393882 0.00628641041457001 0.00463563053368236 NOP53/RPL23/RPS20 3
GO B_7_4 GO:0098554 cytoplasmic side of endoplasmic reticulum membrane 2/22 23/19960 0.00028931505997243 0.00101260270990351 0.00060908433678406 RPL27/RPS29 2