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Selected Module: B_7_4


Module Info

Module_Name B_7_4
Cell_Type B
Name B_7_4: RNA, Nuclear
Meta_Module B_1
Gene_Number 22

Genes:

NOP53, RPL13A, RPL17, RPL18A, RPL21, RPL23, RPL23A, RPL27, RPL27A, RPL31, RPL35, RPL37A, RPL38, RPL7, RPL9, RPS10, RPS11, RPS17, RPS20, RPS29, TPT1, UBA52


UMAP Visualizations


UMAP for B_7_4

UMAP for B_7_4


Word Cloud

Enriched TF

Wordcloud for B_7_4
TF p.adjust Genes
ZZZ3 2.02338402173262e-05 RPL17/RPL27/RPL37A/RPL7/RPS10/RPS20
NPM1 0.0116106518130812 RPL27A/RPL37A/RPS11/RPS20
EPC1 0.0116106518130812 RPL23A/RPS17/TPT1/UBA52
PER1 0.0116106518130812 RPL17/RPL21
MSX1 0.0156688509087623 RPL17/RPL21/RPS11
MCM3 0.017861168951138 NOP53/RPL13A/RPS11
ZNF532 0.025354117897857 RPL17/RPL21
CTR9 0.025354117897857 RPL9/TPT1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_7_4 D012007 Rectum 5/22 249/26076 1.75877492214719e-06 3.64714378592627e-05 2.40674463030668e-05 RPL21/RPL27A/RPL7/RPS10/RPS29 5
MeSH_gene2pubmed B_7_4 D022021 Tacrolimus Binding Proteins 6/22 486/26076 2.35342026937826e-06 4.63623793067518e-05 3.05944635019174e-05 RPL23/RPL35/RPL38/RPS11/TPT1/UBA52 6
GO B_7_4 GO:0006364 rRNA processing 5/22 225/18986 4.99502538413523e-06 0.00023351743670832 0.00017219692771624 NOP53/RPL27/RPL35/RPL7/RPS17 5
MeSH_gene2pubmed B_7_4 D048748 MAP Kinase Kinase Kinase 3 5/22 325/26076 6.45248126082615e-06 0.00012106083889359 7.98878632292761e-05 RPL23/RPL35/RPL38/RPS11/UBA52 5
reactome B_7_4 R-HSA-9694516 SARS-CoV-2 Infection 6/20 299/11146 1.00021524813966e-05 0.00010668962646823 8.15965070850778e-05 RPS10/RPS11/RPS17/RPS20/RPS29/UBA52 6
GO B_7_4 GO:0016072 rRNA metabolic process 5/22 268/18986 1.16791972576687e-05 0.0004368019774368 0.00032209996647465 NOP53/RPL27/RPL35/RPL7/RPS17 5
MeSH_gene2pubmed B_7_4 D012346 RNA, Transfer, Amino Acyl 3/22 63/26076 2.00293485551749e-05 0.00035870742412449 0.00023671048292479 RPL27/RPL7/RPL9 3
MeSH_gene2pubmed B_7_4 D018744 DNA, Plant 3/22 80/26076 4.10564942936716e-05 0.00070331559790028 0.00046411689201541 RPL21/RPL27/RPL9 3
GO B_7_4 GO:0042273 ribosomal large subunit biogenesis 3/22 64/18986 5.37417521030229e-05 0.00167495127387755 0.00123511746061333 NOP53/RPL35/RPL7 3
MeSH_gene2pubmed B_7_4 D012275 Oryza 3/22 88/26076 5.45974160852925e-05 0.00089630758073355 0.00059147200759066 RPL27/RPS10/RPS11 3