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Selected Module: B_7_4


Module Info

Module_Name B_7_4
Cell_Type B
Name B_7_4: RNA, Nuclear
Meta_Module B_1
Gene_Number 22

Genes:

NOP53, RPL13A, RPL17, RPL18A, RPL21, RPL23, RPL23A, RPL27, RPL27A, RPL31, RPL35, RPL37A, RPL38, RPL7, RPL9, RPS10, RPS11, RPS17, RPS20, RPS29, TPT1, UBA52


UMAP Visualizations


UMAP for B_7_4

UMAP for B_7_4


Word Cloud

Enriched TF

Wordcloud for B_7_4
TF p.adjust Genes
ZZZ3 2.02338402173262e-05 RPL17/RPL27/RPL37A/RPL7/RPS10/RPS20
NPM1 0.0116106518130812 RPL27A/RPL37A/RPS11/RPS20
EPC1 0.0116106518130812 RPL23A/RPS17/TPT1/UBA52
PER1 0.0116106518130812 RPL17/RPL21
MSX1 0.0156688509087623 RPL17/RPL21/RPS11
MCM3 0.017861168951138 NOP53/RPL13A/RPS11
ZNF532 0.025354117897857 RPL17/RPL21
CTR9 0.025354117897857 RPL9/TPT1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
reactome B_7_4 R-HSA-72649 Translation initiation complex formation 5/20 59/11146 5.10017712937404e-08 6.12021255524885e-07 4.68075466807683e-07 RPS10/RPS11/RPS17/RPS20/RPS29 5
reactome B_7_4 R-HSA-72702 Ribosomal scanning and start codon recognition 5/20 59/11146 5.10017712937404e-08 6.12021255524885e-07 4.68075466807683e-07 RPS10/RPS11/RPS17/RPS20/RPS29 5
reactome B_7_4 R-HSA-72662 Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S 5/20 60/11146 5.55757204051308e-08 6.46699291986976e-07 4.94597320351882e-07 RPS10/RPS11/RPS17/RPS20/RPS29 5
MeSH_gene2pubmed B_7_4 D006217 D006217 3/22 11/26076 8.56216516999347e-08 2.40963791212673e-06 1.59011638871307e-06 RPL17/RPL21/RPL23 3
reactome B_7_4 R-HSA-9678108 SARS-CoV-1 Infection 6/20 142/11146 1.28707905570614e-07 1.45364222762105e-06 1.11174940105886e-06 RPS10/RPS11/RPS17/RPS20/RPS29/UBA52 6
MeSH_gene2pubmed B_7_4 D018075 RNA, Complementary 6/22 325/26076 2.25735724120314e-07 5.80146457293969e-06 3.82837763696528e-06 RPL13A/RPS10/RPS11/RPS17/RPS20/RPS29 6
MeSH_gene2pubmed B_7_4 D012338 RNA, Ribosomal, 23S 3/22 15/26076 2.35592469967094e-07 5.80146457293969e-06 3.82837763696528e-06 RPL27/RPL7/RPL9 3
MeSH_gene2pubmed B_7_4 D012329 RNA, Bacterial 4/22 82/26076 6.36275334842392e-07 1.47466165839943e-05 9.7312698270013e-06 RPL23/RPL27/RPL7/RPL9 4
reactome B_7_4 R-HSA-9705683 SARS-CoV-2-host interactions 6/20 203/11146 1.06201156470052e-06 1.16517840241429e-05 8.91131508425403e-06 RPS10/RPS11/RPS17/RPS20/RPS29/UBA52 6
MeSH_gene2pubmed B_7_4 D009876 Operon 4/22 96/26076 1.19914917971e-06 2.62480431558744e-05 1.73210437069222e-05 RPL13A/RPL21/RPL23/RPL27 4