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Selected Module: B_7_3


Module Info

Module_Name B_7_3
Cell_Type B
Name B_7_3: Brefeldin A
Meta_Module B_5
Gene_Number 48

Genes:

ACO2, ARF1, ATRAID, CANX, CISD2, CLINT1, CNPY2, COPB2, COPE, COX7A2, CREB3, DCPS, DPM3, DSTN, EIF4G1, EMC7, GANAB, GNL3, GPAA1, IER3IP1, IFI35, IFT27, ISOC2, LAP3, LGALS1, MESD, MPC1, MRPS14, NDUFC2, NUS1, PHPT1, PSMD8, RAB5IF, RER1, REXO2, RTN3, SEC13, SEC63, SLC35B1, SPTSSA, SRP19, SRP72, SURF4, TIMM17A, TMED2, TMEM205, TOP1, YIF1A


UMAP Visualizations


UMAP for B_7_3

UMAP for B_7_3


Word Cloud

Enriched TF

Wordcloud for B_7_3
TF p.adjust Genes
NRF2 0.00157846335581382 CANX/EIF4G1/RAB5IF/REXO2/RTN3/YIF1A
AP1 0.0141292772092284 DSTN/EIF4G1/REXO2/RTN3/YIF1A
TASOR 0.0141292772092284 ACO2/GNL3/MPC1/PSMD8/REXO2
TCF11MAFG 0.0320663285930519 EIF4G1/RAB5IF/REXO2/RTN3
MYCMAX 0.0402032397859811 LAP3/REXO2/SRP72/TOP1
AP1 0.0402032397859811 REXO2/RTN3/SLC35B1/YIF1A
AP1FJ 0.0402032397859811 DSTN/EIF4G1/REXO2/RTN3
AAGWWRNYGGC 0.0402032397859811 ARF1/NUS1/PSMD8


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_7_3 D012314 RNA Cap Analogs 2/48 26/26076 0.00104835347920924 0.038238350381787 0.0337036145985981 DCPS/EIF4G1 2
reactome B_7_3 R-HSA-1428517 Aerobic respiration and respiratory electron transport 5/34 260/11146 0.00106286104777842 0.0349563189047126 0.0313264308818904 ACO2/COX7A2/MPC1/NDUFC2/RAB5IF 5
MeSH_gene2pubmed B_7_3 D006153 Guanosine Diphosphate 5/48 424/26076 0.00106971380453251 0.038238350381787 0.0337036145985981 ARF1/COPE/DCPS/RAB5IF/YIF1A 5
MeSH_gene2pubmed B_7_3 D000116 Acetylgalactosamine 3/48 109/26076 0.00107165936934311 0.038238350381787 0.0337036145985981 ACO2/GANAB/LGALS1 3
MeSH_gene2pubmed B_7_3 D002439 Cefotaxime 3/48 110/26076 0.00110028851373662 0.038238350381787 0.0337036145985981 ACO2/LAP3/LGALS1 3
MeSH_gene2pubmed B_7_3 D001389 Azirines 2/48 27/26076 0.00113089391147614 0.038238350381787 0.0337036145985981 ARF1/SRP19 2
KEGG B_7_3 hsa04141 Protein processing in endoplasmic reticulum 4/24 170/8541 0.00117916623721992 0.0448083170143571 0.0403398975891027 CANX/GANAB/SEC13/SEC63 4
MeSH_gene2pubmed B_7_3 D004697 Endocarditis, Bacterial 3/48 118/26076 0.00134684606183035 0.0441602254212253 0.038923206762944 ACO2/LAP3/LGALS1 3
MeSH_gene2pubmed B_7_3 D017017 D017017 2/48 30/26076 0.00139661107811328 0.0444450937211345 0.0391742921600816 SRP19/SRP72 2
GO B_7_3 GO:0005798 Golgi-associated vesicle 3/48 95/19960 0.00154691770553559 0.0129554357838605 0.00844698483943774 COPB2/COPE/TMED2 3