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Selected Module: B_7_3
Module Info
| Module_Name | B_7_3 |
| Cell_Type | B |
| Name | B_7_3: Brefeldin A |
| Meta_Module | B_5 |
| Gene_Number | 48 |
Genes:
ACO2, ARF1, ATRAID, CANX, CISD2, CLINT1, CNPY2, COPB2, COPE, COX7A2, CREB3, DCPS, DPM3, DSTN, EIF4G1, EMC7, GANAB, GNL3, GPAA1, IER3IP1, IFI35, IFT27, ISOC2, LAP3, LGALS1, MESD, MPC1, MRPS14, NDUFC2, NUS1, PHPT1, PSMD8, RAB5IF, RER1, REXO2, RTN3, SEC13, SEC63, SLC35B1, SPTSSA, SRP19, SRP72, SURF4, TIMM17A, TMED2, TMEM205, TOP1, YIF1A
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| NRF2 | 0.00157846335581382 | CANX/EIF4G1/RAB5IF/REXO2/RTN3/YIF1A |
| AP1 | 0.0141292772092284 | DSTN/EIF4G1/REXO2/RTN3/YIF1A |
| TASOR | 0.0141292772092284 | ACO2/GNL3/MPC1/PSMD8/REXO2 |
| TCF11MAFG | 0.0320663285930519 | EIF4G1/RAB5IF/REXO2/RTN3 |
| MYCMAX | 0.0402032397859811 | LAP3/REXO2/SRP72/TOP1 |
| AP1 | 0.0402032397859811 | REXO2/RTN3/SLC35B1/YIF1A |
| AP1FJ | 0.0402032397859811 | DSTN/EIF4G1/REXO2/RTN3 |
| AAGWWRNYGGC | 0.0402032397859811 | ARF1/NUS1/PSMD8 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| hallmark | B_7_3 | HALLMARK_PROTEIN_SECRETION | HALLMARK_PROTEIN_SECRETION | 5/23 | 96/4384 | 0.00011163927736286 | 0.00223278554725733 | 0.00211527051845431 | ARF1/COPB2/COPE/RER1/TMED2 | 5 |
| GO | B_7_3 | GO:0007029 | endoplasmic reticulum organization | 4/48 | 100/18986 | 0.00011799881368698 | 0.0114606347793488 | 0.010169634600655 | EMC7/RAB5IF/RTN3/TMED2 | 4 |
| MeSH_gene2pubmed | B_7_3 | D006596 | Hexosaminidases | 4/48 | 138/26076 | 0.00012195970857218 | 0.0109967003895922 | 0.0096925873654738 | ACO2/CANX/GANAB/GPAA1 | 4 |
| GO | B_7_3 | GO:0030662 | coated vesicle membrane | 5/48 | 205/19960 | 0.00013015750458225 | 0.00218013820175277 | 0.00142145695793778 | CLINT1/COPB2/COPE/SEC13/TMED2 | 5 |
| MeSH_gene2pubmed | B_7_3 | D015388 | Organelles | 6/48 | 432/26076 | 0.00013602837595676 | 0.0113217463680941 | 0.00997908571796208 | ARF1/COPB2/COPE/DCPS/SEC13/TMED2 | 6 |
| GO | B_7_3 | GO:0140534 | endoplasmic reticulum protein-containing complex | 4/48 | 116/19960 | 0.00017298652982175 | 0.00257557722179064 | 0.00167928444154456 | EMC7/GANAB/GPAA1/SEC63 | 4 |
| GO | B_7_3 | GO:0072595 | maintenance of protein localization in organelle | 3/48 | 43/18986 | 0.00017432085112333 | 0.0150497001469808 | 0.0133544043843019 | GPAA1/RER1/TMED2 | 3 |
| MeSH_gene2pubmed | B_7_3 | D010849 | Picornaviridae | 2/48 | 11/26076 | 0.00018056719589558 | 0.0139552647113587 | 0.0123002916903308 | ARF1/EIF4G1 | 2 |
| GO | B_7_3 | GO:0090114 | COPII-coated vesicle budding | 3/48 | 45/18986 | 0.0001997287673575 | 0.0150656559052358 | 0.0133685627825367 | SEC13/SURF4/TMED2 | 3 |
| GO | B_7_3 | GO:0045047 | protein targeting to ER | 3/48 | 46/18986 | 0.00021328470393512 | 0.0150656559052358 | 0.0133685627825367 | SEC63/SRP19/SRP72 | 3 |