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Selected Module: B_7_3
Module Info
| Module_Name | B_7_3 |
| Cell_Type | B |
| Name | B_7_3: Brefeldin A |
| Meta_Module | B_5 |
| Gene_Number | 48 |
Genes:
ACO2, ARF1, ATRAID, CANX, CISD2, CLINT1, CNPY2, COPB2, COPE, COX7A2, CREB3, DCPS, DPM3, DSTN, EIF4G1, EMC7, GANAB, GNL3, GPAA1, IER3IP1, IFI35, IFT27, ISOC2, LAP3, LGALS1, MESD, MPC1, MRPS14, NDUFC2, NUS1, PHPT1, PSMD8, RAB5IF, RER1, REXO2, RTN3, SEC13, SEC63, SLC35B1, SPTSSA, SRP19, SRP72, SURF4, TIMM17A, TMED2, TMEM205, TOP1, YIF1A
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| NRF2 | 0.00157846335581382 | CANX/EIF4G1/RAB5IF/REXO2/RTN3/YIF1A |
| AP1 | 0.0141292772092284 | DSTN/EIF4G1/REXO2/RTN3/YIF1A |
| TASOR | 0.0141292772092284 | ACO2/GNL3/MPC1/PSMD8/REXO2 |
| TCF11MAFG | 0.0320663285930519 | EIF4G1/RAB5IF/REXO2/RTN3 |
| MYCMAX | 0.0402032397859811 | LAP3/REXO2/SRP72/TOP1 |
| AP1 | 0.0402032397859811 | REXO2/RTN3/SLC35B1/YIF1A |
| AP1FJ | 0.0402032397859811 | DSTN/EIF4G1/REXO2/RTN3 |
| AAGWWRNYGGC | 0.0402032397859811 | ARF1/NUS1/PSMD8 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_7_3 | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | 3/48 | 27/18986 | 4.25069285821068e-05 | 0.00825697087707425 | 0.00732685216349473 | SEC63/SRP19/SRP72 | 3 |
| reactome | B_7_3 | R-HSA-8856688 | Golgi-to-ER retrograde transport | 5/34 | 133/11146 | 4.72774993435315e-05 | 0.00466471326856178 | 0.00418032625774384 | ARF1/COPB2/COPE/SURF4/TMED2 | 5 |
| GO | B_7_3 | GO:0006613 | cotranslational protein targeting to membrane | 3/48 | 32/18986 | 7.14429223811759e-05 | 0.0111022301380347 | 0.0098516029809832 | SEC63/SRP19/SRP72 | 3 |
| MeSH_gene2pubmed | B_7_3 | D050766 | Qb-SNARE Proteins | 4/48 | 121/26076 | 7.32962839940883e-05 | 0.00720968902560032 | 0.00635468261231043 | ARF1/CLINT1/COPB2/COPE | 4 |
| KEGG | B_7_3 | hsa03060 | Protein export | 3/24 | 31/8541 | 8.32289473481418e-05 | 0.00632539999845877 | 0.00569461218697812 | SEC63/SRP19/SRP72 | 3 |
| GO | B_7_3 | GO:0030117 | membrane coat | 4/48 | 97/19960 | 8.65535293777941e-05 | 0.0016568818480892 | 0.00108029217118149 | CLINT1/COPB2/COPE/SEC13 | 4 |
| GO | B_7_3 | GO:0048475 | coated membrane | 4/48 | 97/19960 | 8.65535293777941e-05 | 0.0016568818480892 | 0.00108029217118149 | CLINT1/COPB2/COPE/SEC13 | 4 |
| GO | B_7_3 | GO:0045185 | maintenance of protein location | 4/48 | 95/18986 | 9.66905447315594e-05 | 0.0113348235058318 | 0.0100579955243783 | CREB3/GPAA1/RER1/TMED2 | 4 |
| reactome | B_7_3 | R-HSA-199977 | ER to Golgi Anterograde Transport | 5/34 | 155/11146 | 9.79505548677184e-05 | 0.00724834106021116 | 0.00649566837543817 | ARF1/COPB2/COPE/SEC13/TMED2 | 5 |
| GO | B_7_3 | GO:0035459 | vesicle cargo loading | 3/48 | 36/18986 | 0.00010211552707956 | 0.0113348235058318 | 0.0100579955243783 | SEC13/SURF4/TMED2 | 3 |