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Selected Module: B_7_3
Module Info
| Module_Name | B_7_3 |
| Cell_Type | B |
| Name | B_7_3: Brefeldin A |
| Meta_Module | B_5 |
| Gene_Number | 48 |
Genes:
ACO2, ARF1, ATRAID, CANX, CISD2, CLINT1, CNPY2, COPB2, COPE, COX7A2, CREB3, DCPS, DPM3, DSTN, EIF4G1, EMC7, GANAB, GNL3, GPAA1, IER3IP1, IFI35, IFT27, ISOC2, LAP3, LGALS1, MESD, MPC1, MRPS14, NDUFC2, NUS1, PHPT1, PSMD8, RAB5IF, RER1, REXO2, RTN3, SEC13, SEC63, SLC35B1, SPTSSA, SRP19, SRP72, SURF4, TIMM17A, TMED2, TMEM205, TOP1, YIF1A
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| NRF2 | 0.00157846335581382 | CANX/EIF4G1/RAB5IF/REXO2/RTN3/YIF1A |
| AP1 | 0.0141292772092284 | DSTN/EIF4G1/REXO2/RTN3/YIF1A |
| TASOR | 0.0141292772092284 | ACO2/GNL3/MPC1/PSMD8/REXO2 |
| TCF11MAFG | 0.0320663285930519 | EIF4G1/RAB5IF/REXO2/RTN3 |
| MYCMAX | 0.0402032397859811 | LAP3/REXO2/SRP72/TOP1 |
| AP1 | 0.0402032397859811 | REXO2/RTN3/SLC35B1/YIF1A |
| AP1FJ | 0.0402032397859811 | DSTN/EIF4G1/REXO2/RTN3 |
| AAGWWRNYGGC | 0.0402032397859811 | ARF1/NUS1/PSMD8 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_7_3 | D020126 | Brefeldin A | 10/48 | 499/26076 | 2.05246572054589e-08 | 2.22076790963066e-05 | 1.95740415033114e-05 | ARF1/CANX/CLINT1/COPB2/COPE/CREB3/RER1/SURF4/TMED2/YIF1A | 10 |
| GO | B_7_3 | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | 7/48 | 132/18986 | 3.88545545023011e-08 | 3.0189988848288e-05 | 2.67891928410603e-05 | COPB2/COPE/IER3IP1/SEC13/SURF4/TMED2/YIF1A | 7 |
| reactome | B_7_3 | R-HSA-446203 | Asparagine N-linked glycosylation | 9/34 | 306/11146 | 2.25840030173593e-07 | 6.68486489313837e-05 | 5.99070395828901e-05 | ARF1/CANX/COPB2/COPE/DPM3/GANAB/NUS1/SEC13/TMED2 | 9 |
| MeSH_gene2pubmed | B_7_3 | D002966 | D002966 | 9/48 | 494/26076 | 2.54367313573309e-07 | 0.00013761271664316 | 0.00012129304531443 | ARF1/CLINT1/COPB2/COPE/EIF4G1/LGALS1/RAB5IF/SEC13/YIF1A | 9 |
| MeSH_gene2pubmed | B_7_3 | D020755 | Coat Protein Complex I | 5/48 | 89/26076 | 6.30508154041365e-07 | 0.00022740327422425 | 0.00020043522370578 | ARF1/COPB2/COPE/SEC13/TMED2 | 5 |
| GO | B_7_3 | GO:0030135 | coated vesicle | 8/48 | 320/19960 | 8.63889072775356e-07 | 0.00011576113575189 | 7.54766242530048e-05 | CLINT1/COPB2/COPE/IER3IP1/SEC13/SURF4/TMED2/YIF1A | 8 |
| GO | B_7_3 | GO:0048193 | Golgi vesicle transport | 8/48 | 308/18986 | 9.40474611855191e-07 | 0.00036537438670574 | 0.00032421624777113 | COPB2/COPE/IER3IP1/RER1/SEC13/SURF4/TMED2/YIF1A | 8 |
| GO | B_7_3 | GO:0070972 | protein localization to endoplasmic reticulum | 5/48 | 83/18986 | 2.08808745370875e-06 | 0.00054081465051056 | 0.00047989378322078 | GPAA1/RER1/SEC63/SRP19/SRP72 | 5 |
| MeSH_gene2pubmed | B_7_3 | D020756 | Coatomer Protein | 5/48 | 119/26076 | 2.66222644642407e-06 | 0.00072013225375771 | 0.00063473083170005 | ARF1/COPB2/COPE/SEC13/TMED2 | 5 |
| GO | B_7_3 | GO:0030134 | COPII-coated ER to Golgi transport vesicle | 5/48 | 95/19960 | 3.19843346287469e-06 | 0.0002142950420126 | 0.00013972104074663 | IER3IP1/SEC13/SURF4/TMED2/YIF1A | 5 |