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Selected Module: B_5_2


Module Info

Module_Name B_5_2
Cell_Type B
Name B_5_2: Protein processing in endoplasmic reticulum
Meta_Module B_2
Gene_Number 40

Genes:

ACADVL, ARMCX3, CD27, CHID1, CHST12, DNAJB9, EDEM1, FBH1, GALNT2, GLT8D1, IFNAR2, JCHAIN, KDELR2, KRTCAP2, LMO4, MAN1A2, MANF, MEI1, NMRK1, OSTC, PDIA3, PIM2, PLD3, RRBP1, SDF2L1, SDF4, SEC14L1, SERP1, SLC38A10, SPATS2, SSR4, TAPBPL, TENT5C, TM9SF2, TMEM59, TPST2, TXNDC11, UBXN4, WDR45, XBP1


UMAP Visualizations


UMAP for B_5_2

UMAP for B_5_2


Word Cloud

Enriched TF

Wordcloud for B_5_2
No TF enriched


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
reactome B_5_2 R-HSA-381119 Unfolded Protein Response (UPR) 5/23 95/11146 1.20553697511778e-06 3.01384243779445e-05 2.32647486426238e-05 ACADVL/DNAJB9/EDEM1/SERP1/XBP1 5
GO B_5_2 GO:0035967 cellular response to topologically incorrect protein 5/36 114/18986 2.32177070445247e-06 0.00023549388573732 0.00019481925610292 DNAJB9/EDEM1/SDF2L1/SERP1/XBP1 5
GO B_5_2 GO:0006486 protein glycosylation 6/36 223/18986 3.56168601478565e-06 0.00028097745227753 0.00023244687675443 GALNT2/KRTCAP2/MAN1A2/OSTC/SERP1/TMEM59 6
GO B_5_2 GO:0043413 macromolecule glycosylation 6/36 223/18986 3.56168601478565e-06 0.00028097745227753 0.00023244687675443 GALNT2/KRTCAP2/MAN1A2/OSTC/SERP1/TMEM59 6
GO B_5_2 GO:0051787 misfolded protein binding 3/37 16/18737 3.89979499044874e-06 0.00043677703893025 0.00032019369395263 DNAJB9/EDEM1/SDF2L1 3
GO B_5_2 GO:0070085 glycosylation 6/36 242/18986 5.69927955061153e-06 0.00040464884809341 0.00033475768307802 GALNT2/KRTCAP2/MAN1A2/OSTC/SERP1/TMEM59 6
MeSH_gene2pubmed B_5_2 D007212 D007212 4/40 85/26076 8.78551901342772e-06 0.00331214066806225 0.00306568373994873 EDEM1/MAN1A2/PDIA3/XBP1 4
MeSH_gene2pubmed B_5_2 D017485 1-Deoxynojirimycin 4/40 85/26076 8.78551901342772e-06 0.00331214066806225 0.00306568373994873 EDEM1/GLT8D1/MAN1A2/PDIA3 4
GO B_5_2 GO:0030968 endoplasmic reticulum unfolded protein response 4/36 85/18986 1.97558610079131e-05 0.00127515102869257 0.00105490626243211 DNAJB9/EDEM1/SERP1/XBP1 4
WikiPathways B_5_2 WP3613 Photodynamic therapy induced unfolded protein response 3/19 27/8836 2.38677526308986e-05 0.00109791662102133 0.00092958615509815 DNAJB9/EDEM1/XBP1 3