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Selected Module: B_5_2


Module Info

Module_Name B_5_2
Cell_Type B
Name B_5_2: Protein processing in endoplasmic reticulum
Meta_Module B_2
Gene_Number 40

Genes:

ACADVL, ARMCX3, CD27, CHID1, CHST12, DNAJB9, EDEM1, FBH1, GALNT2, GLT8D1, IFNAR2, JCHAIN, KDELR2, KRTCAP2, LMO4, MAN1A2, MANF, MEI1, NMRK1, OSTC, PDIA3, PIM2, PLD3, RRBP1, SDF2L1, SDF4, SEC14L1, SERP1, SLC38A10, SPATS2, SSR4, TAPBPL, TENT5C, TM9SF2, TMEM59, TPST2, TXNDC11, UBXN4, WDR45, XBP1


UMAP Visualizations


UMAP for B_5_2

UMAP for B_5_2


Word Cloud

Enriched TF

Wordcloud for B_5_2
No TF enriched


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
KEGG B_5_2 hsa04141 Protein processing in endoplasmic reticulum 8/18 170/8541 7.71824382063411e-10 3.16447996645999e-08 3.0060528564575e-08 EDEM1/MAN1A2/OSTC/PDIA3/RRBP1/SSR4/UBXN4/XBP1 8
GO B_5_2 GO:0034976 response to endoplasmic reticulum stress 9/36 277/18986 1.75457937928746e-09 1.2457513592941e-06 1.03058451962358e-06 DNAJB9/EDEM1/MAN1A2/MANF/PDIA3/SDF2L1/SERP1/UBXN4/XBP1 9
GO B_5_2 GO:0035966 response to topologically incorrect protein 7/36 160/18986 1.79883949481937e-08 6.38588020660876e-06 5.28290756899583e-06 DNAJB9/EDEM1/MANF/SDF2L1/SERP1/UBXN4/XBP1 7
GO B_5_2 GO:0009100 glycoprotein metabolic process 9/36 392/18986 3.57739342593742e-08 8.46649777471855e-06 7.00415976025642e-06 CHST12/EDEM1/GALNT2/KRTCAP2/MAN1A2/OSTC/SERP1/TM9SF2/TMEM59 9
reactome B_5_2 R-HSA-381038 XBP1(S) activates chaperone genes 5/23 50/11146 4.68465046005338e-08 2.14908712906211e-06 1.65894445050409e-06 ACADVL/DNAJB9/EDEM1/SERP1/XBP1 5
reactome B_5_2 R-HSA-381070 IRE1alpha activates chaperones 5/23 52/11146 5.73089901083229e-08 2.14908712906211e-06 1.65894445050409e-06 ACADVL/DNAJB9/EDEM1/SERP1/XBP1 5
GO B_5_2 GO:0036503 ERAD pathway 6/36 113/18986 6.54770060242293e-08 1.16221685693007e-05 9.6147814109263e-06 DNAJB9/EDEM1/MAN1A2/SDF2L1/UBXN4/XBP1 6
GO B_5_2 GO:0140534 endoplasmic reticulum protein-containing complex 6/39 116/19960 9.43607344327499e-08 6.88833361359075e-06 5.06568153270552e-06 KRTCAP2/OSTC/PDIA3/SDF2L1/SSR4/TAPBPL 6
GO B_5_2 GO:0009101 glycoprotein biosynthetic process 8/36 322/18986 1.25607016778725e-07 1.78361963825789e-05 1.47555190236902e-05 CHST12/GALNT2/KRTCAP2/MAN1A2/OSTC/SERP1/TM9SF2/TMEM59 8
GO B_5_2 GO:0006986 response to unfolded protein 6/36 143/18986 2.65699841761843e-07 3.14411479418181e-05 2.60106160882647e-05 DNAJB9/EDEM1/MANF/SERP1/UBXN4/XBP1 6